Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mevan_1356 |
Symbol | |
ID | 5324846 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus vannielii SB |
Kingdom | Archaea |
Replicon accession | NC_009634 |
Strand | - |
Start bp | 1383186 |
End bp | 1384307 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640787051 |
Product | 2-hydroxyglutaryl-CoA dehydratase D-component |
Protein accession | YP_001323865 |
Protein GI | 150400098 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1775] Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0888918 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATGGTT TAAAGTCGAT TGATGAATTA AATAATGCAT TTTCAAAAAG AAGGGATGAA TTATACGGTC AAAAAAATGA TGGAAAAAAG GTATTCGGAT TGTTTTGTAC ATTTGTACCT ACTGAATTAA TTTTAGCAGC TGATGCAATT CCGGTTGGAC TTTGTGGTGG GAAAGAAGTG ACAATTCCTT CAGCAGAAGA AGATTTACCG AGAAATATTT GCCCTTTAAT CAAATCATCA TATGGATTTA AAAAAGACAA AGCCTGCCCA TACATTGAAG CTTCTGACAT TATTATTGGA GAAACTACTT GTGATGGAAA GAAAAAAATG TTTGAACACA TGTCTGAAAT GGTAAAACTG CATGTTATGC AATTGCCACA TTTTAGAGAT GAAAGATCTG CTAAATTATG GTTGGAAGAA GTAAGGGATT TAAAAGAACT AATTGAAGAA GAAACAGGGA ACAAAATTAC TGAAGAAAAG TTAAAAGAAG CCATTGATAA AGTAAATAAG TTAAGAGAAT TGTTTTATAA GGTTTATGAA CTTAGGAGAA ATAAAATAAG CCCTATAAAG GGAACTGACG CTTTAAAATT ATTCCAAATG TCTTATCTTT TAGATATAAA TACGATTACT GGAATTATTG AAAATTTAAT TAATGAACTC GAAGAAAGAG TTGAAAATAA TGAAGGTTAC TCTGGAAAAA GAATATTAAT TGCAGGATGC CCAATGGTTG CTGGAAACAC CAAAATTCCA GAAATAGTCG AAAATATCGG TGGAGTAGTC GTTGGAGAAG AATCATGTAC CGGAACTAGG CAGTTTGAAA ATTATGTTGA AGGATACTCA ATTGAAGATT TATCTAGCCG ATATTTTAAA ATTCCTTGTG CTTGCACCTA TAGTAATGAA GATAGAATTA AAAGACTCAA GGAATTAGTA GATGAACAGA AAGCAGATGG CGTAATATAC TATACTCTTC AAAACTGTCA TACTTTTAAT ATTGAAGGAG CATTAGTCGA GAAAAAATTA AAAGAAGTGG GTATACCAAT AGTAAGAATA GAAACCGATT ATTCTGAAAG CGATAAAGAA CAGATAAAAA CAAGGCTTGA AGCATTTTTA GAAATGATTT AA
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Protein sequence | MDGLKSIDEL NNAFSKRRDE LYGQKNDGKK VFGLFCTFVP TELILAADAI PVGLCGGKEV TIPSAEEDLP RNICPLIKSS YGFKKDKACP YIEASDIIIG ETTCDGKKKM FEHMSEMVKL HVMQLPHFRD ERSAKLWLEE VRDLKELIEE ETGNKITEEK LKEAIDKVNK LRELFYKVYE LRRNKISPIK GTDALKLFQM SYLLDINTIT GIIENLINEL EERVENNEGY SGKRILIAGC PMVAGNTKIP EIVENIGGVV VGEESCTGTR QFENYVEGYS IEDLSSRYFK IPCACTYSNE DRIKRLKELV DEQKADGVIY YTLQNCHTFN IEGALVEKKL KEVGIPIVRI ETDYSESDKE QIKTRLEAFL EMI
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