| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_3912 |
|---|
| Symbol | |
|---|
| ID | 7260933 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 4147492 |
|---|
| End bp | 4148646 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 643563835 |
|---|
| Product | 2-hydroxyglutaryl-CoA dehydratase D-component |
|---|
| Protein accession | YP_002460363 |
|---|
| Protein GI | 219669928 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1775] Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 66 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAAA TTCAGCTGCC TAGCCAATTT GAAAGTTTTG CTGAGGCGCG GAAACAAGGG
TTCATTGCAG TTAAAAACCT GAAAGAGCAG GGAAAGAAAG TGGCGGGAGT GTTCTGTACC
TACGCCCCGG TGGAATTGGT CCTCGCTGCG GGAGCCGTGC CTGTGGGGCT TTGTGCTTTT
AGTGACGAGA CCATTCCCGA AGCTGAGAAA GTCCTGCCCC GGAACCTCTG TCCCCTGGTC
AAATCCAGCT ACGGCTTTGC CATCACCGAC AAATGTCCTT ATATGTTTTT TTCTGATCTG
ATGATCGGTG AGACCACCTG CGACGGCAAG AAAAAGATGT ATGAGCTTTT AGGAGAATTC
AAAAACCTCC ATGTCATGCA GCTTCCCCAG ACCCAACAGG ATGAAGCTTC CCAAGAACTG
TGGTATCAAG AAGTTCTGCG TCTGAAGGAC AGAATCGAGC AGGATTTCGG AGTAACCATC
ACCGAGGAAG GTATCAAAAA TGCCATCAAG GTAAAAAATG AGGAACGTAA GCTCCTCAAA
GAATTTTACG AGCTCAGCAA ATCCTGTCCT CCCCCCATCA CCGGGGCGGA ACAGCTTAAA
GTCCTCTATG GCTCTCAGTT CAAGTTCGAC CCCGAGGCCA AGAACCGGGA AATCAGGGAA
ACCATCGACA AAGTCAAAGC CGATCAGGCT AAGGGCGTGG AAAATGTCTC CCCCGCCGCG
AAACGCATCC TGATCACAGG CTGTCCTTTG GCCGGGGTCA CCGAGAAGGT GGTCAGAGCC
ATCGAAGAGT CCGGCGGCGT GGTCGTGGCT TATGAAAACT GTATCGGGGT TAAACCCGTG
GAGCGCCTGG TTGACGAAAC CATCGATCCC TACAAGGCCC TTGCCGACCG GTATCTGCAG
ATCGGCTGCT CCGTCATGAC CCCCAACCCC AACCGCCTGG ATCTGCTGAG CCGGCTGGTC
CGGGAATTCA AGGTGGACGG CGTTGTGGAA ATGACCCTCC AGGCCTGCCA CACCTACAAT
CTGGAAACCA CCCAGATCCG CAAGCACATG CAAAAAGAAG ATATGCCCTT TATCAGCGTG
GAGACCGACT ATTCCACTTC GGATGCCGCC CAGCTTAAAA CCCGCCTGGC TGCGTTCATT
GAGATGCTCT CGTGA
|
|---|
| Protein sequence | MSEIQLPSQF ESFAEARKQG FIAVKNLKEQ GKKVAGVFCT YAPVELVLAA GAVPVGLCAF
SDETIPEAEK VLPRNLCPLV KSSYGFAITD KCPYMFFSDL MIGETTCDGK KKMYELLGEF
KNLHVMQLPQ TQQDEASQEL WYQEVLRLKD RIEQDFGVTI TEEGIKNAIK VKNEERKLLK
EFYELSKSCP PPITGAEQLK VLYGSQFKFD PEAKNREIRE TIDKVKADQA KGVENVSPAA
KRILITGCPL AGVTEKVVRA IEESGGVVVA YENCIGVKPV ERLVDETIDP YKALADRYLQ
IGCSVMTPNP NRLDLLSRLV REFKVDGVVE MTLQACHTYN LETTQIRKHM QKEDMPFISV
ETDYSTSDAA QLKTRLAAFI EMLS
|
|---|
| |