25 homologs were found in PanDaTox collection
for query gene M446_3008 on replicon NC_010511
Organism: Methylobacterium sp. 4-46



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010511  M446_3008  XRE family transcriptional regulator  100 
 
 		 295 aa  589  1e-167  Methylobacterium sp. 4-46  Bacteria  normal  0.149161  normal  0.119045 
 
 
-
 
NC_010557  BamMC406_5686  XRE family transcriptional regulator  44.79 
 
 		 304 aa  257  2e-67  Burkholderia ambifaria MC40-6  Bacteria  normal  0.884955  normal  0.066363 
 
 
-
 
NC_010322  PputGB1_1773  XRE family transcriptional regulator  46.32 
 
 		 291 aa  250  2e-65  Pseudomonas putida GB-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009484  Acry_2262  helix-turn-helix domain-containing protein  40.97 
 
 		 293 aa  209  4e-53  Acidiphilium cryptum JF-5  Bacteria  normal  0.827528  n/a   
 
 
-
 
NC_009636  Smed_3471  XRE family transcriptional regulator  45.31 
 
 		 197 aa  50.8  0.00002  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009051  Memar_1391  hypothetical protein  38.03 
 
 		 342 aa  47.8  0.0002  Methanoculleus marisnigri JR1  Archaea  normal  1  n/a   
 
 
-
 
NC_011894  Mnod_0127  transcriptional regulator, XRE family  31.91 
 
 		 193 aa  46.2  0.0006  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.116873  n/a   
 
 
-
 
NC_011004  Rpal_3044  putative phage repressor  38.98 
 
 		 264 aa  45.8  0.0008  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009484  Acry_2653  XRE family transcriptional regulator  38.1 
 
 		 110 aa  45.8  0.0008  Acidiphilium cryptum JF-5  Bacteria  normal  0.0200481  n/a   
 
 
-
 
NC_008688  Pden_4870  XRE family transcriptional regulator  42.19 
 
 		 211 aa  45.4  0.001  Paracoccus denitrificans PD1222  Bacteria  normal  1  normal  0.523431 
 
 
-
 
NC_013093  Amir_3942  transcriptional regulator, XRE family  38.1 
 
 		 197 aa  44.3  0.002  Actinosynnema mirum DSM 43827  Bacteria  normal  0.534044  n/a   
 
 
-
 
NC_012912  Dd1591_4021  transcriptional regulator, XRE family  34.94 
 
 		 156 aa  44.3  0.002  Dickeya zeae Ech1591  Bacteria  normal  1  n/a   
 
 
-
 
NC_012669  Bcav_3260  transcriptional regulator, XRE family  44.44 
 
 		 513 aa  44.7  0.002  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0795644  normal  0.23679 
 
 
-
 
NC_007406  Nwi_1957  XRE family transcriptional regulator  31.64 
 
 		 410 aa  44.7  0.002  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.63284  normal  1 
 
 
-
 
NC_007333  Tfu_1248  helix-hairpin-helix DNA-binding motif-containing protein  30.13 
 
 		 267 aa  44.7  0.002  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_010625  Bphy_6405  XRE family transcriptional regulator  41.67 
 
 		 189 aa  43.9  0.003  Burkholderia phymatum STM815  Bacteria  normal  0.146143  normal  0.496408 
 
 
-
 
NC_008148  Rxyl_2505  XRE family transcriptional regulator  31.82 
 
 		 220 aa  43.9  0.003  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_011901  Tgr7_1702  transcriptional regulator, XRE family  42.62 
 
 		 218 aa  43.9  0.003  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  1  n/a   
 
 
-
 
NC_012856  Rpic12D_0099  transcriptional regulator, XRE family  46.67 
 
 		 194 aa  44.3  0.003  Ralstonia pickettii 12D  Bacteria  normal  1  normal  0.798061 
 
 
-
 
NC_004349  SO_A0002  type II restriction-modification system activator, putative  40.32 
 
 		 75 aa  43.1  0.005  Shewanella oneidensis MR-1  Bacteria  hitchhiker  0.00243501  n/a   
 
 
-
 
NC_008699  Noca_2672  UDP-N-acetylglucosamine 1-carboxyvinyltransferase  38.24 
 
 		 508 aa  43.1  0.006  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_014158  Tpau_1453  transcriptional regulator, XRE family  41.94 
 
 		 171 aa  42.4  0.009  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_014165  Tbis_3045  XRE family transcriptional regulator  44 
 
 		 406 aa  42.4  0.01  Thermobispora bispora DSM 43833  Bacteria  normal  0.181635  normal  1 
 
 
-
 
NC_010483  TRQ2_0273  XRE family transcriptional regulator  35 
 
 		 176 aa  42.4  0.01  Thermotoga sp. RQ2  Bacteria  decreased coverage  0.0000144131  n/a   
 
 
-
 
NC_007912  Sde_0379  transcriptional regulator  38.71 
 
 		 184 aa  42.4  0.01  Saccharophagus degradans 2-40  Bacteria  normal  1  normal  0.808324 
 
 
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