20 homologs were found in PanDaTox collection
for query gene PputGB1_1773 on replicon NC_010322
Organism: Pseudomonas putida GB-1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010322  PputGB1_1773  XRE family transcriptional regulator  100 
 
 		 291 aa  585  1e-166  Pseudomonas putida GB-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010557  BamMC406_5686  XRE family transcriptional regulator  48.44 
 
 		 304 aa  288  7e-77  Burkholderia ambifaria MC40-6  Bacteria  normal  0.884955  normal  0.066363 
 
 
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NC_010511  M446_3008  XRE family transcriptional regulator  46.32 
 
 		 295 aa  221  9.999999999999999e-57  Methylobacterium sp. 4-46  Bacteria  normal  0.149161  normal  0.119045 
 
 
-
 
NC_009484  Acry_2262  helix-turn-helix domain-containing protein  32.87 
 
 		 293 aa  166  4e-40  Acidiphilium cryptum JF-5  Bacteria  normal  0.827528  n/a   
 
 
-
 
NC_009484  Acry_2653  XRE family transcriptional regulator  32.39 
 
 		 110 aa  46.2  0.0006  Acidiphilium cryptum JF-5  Bacteria  normal  0.0200481  n/a   
 
 
-
 
NC_007953  Bxe_C0772  transcriptional regulator  34.57 
 
 		 204 aa  45.4  0.001  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  0.855503 
 
 
-
 
NC_008688  Pden_4870  XRE family transcriptional regulator  37.88 
 
 		 211 aa  44.7  0.002  Paracoccus denitrificans PD1222  Bacteria  normal  1  normal  0.523431 
 
 
-
 
NC_013411  GYMC61_3288  transcriptional regulator, XRE family  34.38 
 
 		 135 aa  44.7  0.002  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009380  Strop_3359  helix-turn-helix domain-containing protein  24.59 
 
 		 407 aa  44.7  0.002  Salinispora tropica CNB-440  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011661  Dtur_1292  transcriptional regulator, XRE family  36 
 
 		 110 aa  44.7  0.002  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.020008  n/a   
 
 
-
 
NC_014165  Tbis_0300  helix-turn-helix domain-containing protein  33.33 
 
 		 370 aa  43.9  0.003  Thermobispora bispora DSM 43833  Bacteria  normal  0.193502  normal  1 
 
 
-
 
NC_011886  Achl_3519  transcriptional regulator, XRE family  36.76 
 
 		 210 aa  43.9  0.003  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.0116433 
 
 
-
 
NC_009073  Pcal_0791  XRE family transcriptional regulator  32.26 
 
 		 528 aa  43.5  0.004  Pyrobaculum calidifontis JCM 11548  Archaea  n/a    normal  1 
 
 
-
 
NC_008786  Veis_3035  XRE family transcriptional regulator  34.92 
 
 		 208 aa  43.5  0.004  Verminephrobacter eiseniae EF01-2  Bacteria  normal  1  normal  0.348685 
 
 
-
 
NC_013205  Aaci_1064  transcriptional regulator, XRE family  40.91 
 
 		 206 aa  43.1  0.005  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.0300833  n/a   
 
 
-
 
NC_013204  Elen_1666  transcriptional regulator, XRE family  35.96 
 
 		 205 aa  42.7  0.006  Eggerthella lenta DSM 2243  Bacteria  normal  0.130033  hitchhiker  0.00224482 
 
 
-
 
NC_013216  Dtox_4004  transcriptional regulator, XRE family  40.91 
 
 		 181 aa  42.7  0.008  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010625  Bphy_6405  XRE family transcriptional regulator  38.24 
 
 		 189 aa  42.4  0.009  Burkholderia phymatum STM815  Bacteria  normal  0.146143  normal  0.496408 
 
 
-
 
NC_008048  Sala_2190  XRE family transcriptional regulator  34.48 
 
 		 222 aa  42.4  0.009  Sphingopyxis alaskensis RB2256  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011658  BCAH187_A4032  prophage LambdaBa02, repressor protein  37.1 
 
 		 114 aa  42.4  0.01  Bacillus cereus AH187  Bacteria  hitchhiker  0.00194689  n/a   
 
 
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