| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1773 |
|---|
| Symbol | |
|---|
| ID | 5869553 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 1991215 |
|---|
| End bp | 1992090 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641546890 |
|---|
| Product | XRE family transcriptional regulator |
|---|
| Protein accession | YP_001668012 |
|---|
| Protein GI | 167032781 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAACCAGA TTGATTACCA AGCAATCGGC GAACGTCTCA GGGCTTTTCG AATTGGCCGT
CAGCTGAATG CCGATCAGGT TGCAGAAAAG CTCGGCATCT CGCGTGCTGC GGTTTATCGC
CTCGAACTCG GCAAAATCGT AAAGCTCGAA ACGCTGGAGC GGTTGGCGGA GCTGTTGAAG
GTCTCGCTGA CCAGCCTGCT GGGTTCAGAC ACGGAGTACT TCGACAATGC GCTGGGTTAC
TTCGAGCGCA TGAGGCAGCT GGAAGCGAGG TCCAGCAGCA TCATCTCCTA CTTCGATCCG
TTCTCTTATC TCCTGACAAC GCCTGAGTAC TCTGAGCTGT TCAAAACGAT GCTCTACGAG
GCCAGGCCTC GGGTTTTCAG CGGTGCTCAA GAAGCGATGG AAGACCAGAT ACTGAGTATC
CTGGACGAGC GGAAATCCAC CTTCTTCCGC CAAAAATTCG AGGTCAAGTC CATCGTCGGT
CTGCGCCAGA TCGAGCGCTA TTTGCACATT GGCCTAGTAG GTCGTTTGGA CTTACCGCCC
AGTGTTCGTA TGGAGCGGGC TTTGCTCGCC CGCCGAGAGA TCGAAAACCT GATCAGCATC
GTGGAATCGA ACAGCGATCA TCCGAACATC TATCTGATCG ACGAAGCGCT CCCAAGCGCC
ACCTTCCAGA TCTTCGAACA GAAAAACACA AGCTACGTAG CAGTCAGCCC GTACCGACTG
GGCGAATTGC CCAATCTGCA TGTAGGCATT GCTAGCGTGA CGTCATCGGC CCAGGCGGTA
GACATGTACA AAGCCATGTC TACCGACTTG TTGAGCCGAG CATATTCAGG CCGAGACGCT
ATGAGGAAGC TCCAGCAGCT GCTAGCAAAG TTGTAA
|
|---|
| Protein sequence | MNQIDYQAIG ERLRAFRIGR QLNADQVAEK LGISRAAVYR LELGKIVKLE TLERLAELLK
VSLTSLLGSD TEYFDNALGY FERMRQLEAR SSSIISYFDP FSYLLTTPEY SELFKTMLYE
ARPRVFSGAQ EAMEDQILSI LDERKSTFFR QKFEVKSIVG LRQIERYLHI GLVGRLDLPP
SVRMERALLA RREIENLISI VESNSDHPNI YLIDEALPSA TFQIFEQKNT SYVAVSPYRL
GELPNLHVGI ASVTSSAQAV DMYKAMSTDL LSRAYSGRDA MRKLQQLLAK L
|
|---|
| |