| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3359 |
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| Symbol | |
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| ID | 5059825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 3852633 |
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| End bp | 3853856 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640475607 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_001160170 |
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| Protein GI | 145595873 |
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| COG category | [K] Transcription |
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| COG ID | [COG1396] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGAGC TACCCATCGG GCGTCGGGTG GCCTACTGGC GGGGGCGACG CAAGATGTCC
CAGCAGGTCT TCGCAGACCG GCTGGGTAAG TCGAAAAGCT GGGTGGACAA GGTCGAGCGC
GGAGTGCGTC GGCTGGACAA GTTCTCCGTC ATCTACGAGA TCGCCGACAC CCTCCGGGTT
GACGTGCAGC TCCTACTCGG CAAGGACCCG GAACGGCGTT CTGACGCGCT GAACTGCATC
GACCAGACCG AGGTGCAGGA GATTCGGGCG GCGCTGGAGC GGTACGACGC GATGAGCGCC
TACTTCGACG CGGCACCGTA CCCGCCGCCC CTGCCCGACA TGCGCAAGGC CGTCACCCAC
GCCTGGTTGA CCTATCAGTA CGGCCGGTAC GGGATGCTGA CTCGCTCGCT GCCCAAGCTT
CTGCGGGACG CTCAGGCGGC CGACGCCGGC TTCGGAGGCG ACGACAACCG GGAGGCGGCG
CACCTGCTCG GGCAGGTCTA CCAGATTGCC TCGTCGGTCC TGCGCAAGCT GGGGGAGTTC
GACCTGGCGT GGCTCGCCGC CGATCGGGCG ATGGCGGTCG CCCAACGGGC CGACGATCCG
CTGTTGGCCG GCATCGCCAC CACCCGGGTC GGTAACGCGC TCGTCGCGAT GGGACGCCCC
TTCCCGGCAC TGGAGGTAAA TGTCGCCATC GCGAACCGGT TGGCCCCGGG CGGTGGCAAC
GACGTCACCC CGGACCGGCT GTCGGTCTAC GGCATGCTGC TGCTCCAGGG CGCGATGGCC
GCCTCCCGGA TCGGTGACAC CGCCACAGTG GATGACCTGC TGGGCGGCGC CGACGAGGCC
GCCAGCCTGC TCGGTGGCGA CCAGAACCAC TACTGGACCT CCTTCGGGCC CACCAACGTG
GAGCTGCACC GCGCCGCGGC GGCCGTCGAG CTGGGCGACG GCGGCCGGGC GGTGGAGGTC
CACCAGCGCA TCGGGCCGGA GTTCAACGCT CTGCTACCCG AGCGCCGCGC CCACCACCTG
CTCGACATCG CCCGGGGCTA CGCACAGGTT GGTGACGTGG TGAACGCCGG CGAGATGCTG
TTGCAGGGTG ACCGGCTCGC CCCGTCGGAG ATTCGTTGCC GGCCGATCGC CCACGAGGTG
ATGTCCGACA TTCTGCGTCG TACCCGTGGC ACCCCACCCG CCTCGATCGC GGAGTTGGCT
GAACATATGG GAGTCGGGAT ATGA
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| Protein sequence | MDELPIGRRV AYWRGRRKMS QQVFADRLGK SKSWVDKVER GVRRLDKFSV IYEIADTLRV
DVQLLLGKDP ERRSDALNCI DQTEVQEIRA ALERYDAMSA YFDAAPYPPP LPDMRKAVTH
AWLTYQYGRY GMLTRSLPKL LRDAQAADAG FGGDDNREAA HLLGQVYQIA SSVLRKLGEF
DLAWLAADRA MAVAQRADDP LLAGIATTRV GNALVAMGRP FPALEVNVAI ANRLAPGGGN
DVTPDRLSVY GMLLLQGAMA ASRIGDTATV DDLLGGADEA ASLLGGDQNH YWTSFGPTNV
ELHRAAAAVE LGDGGRAVEV HQRIGPEFNA LLPERRAHHL LDIARGYAQV GDVVNAGEML
LQGDRLAPSE IRCRPIAHEV MSDILRRTRG TPPASIAELA EHMGVGI
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