| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_3008 |
|---|
| Symbol | |
|---|
| ID | 6128998 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | - |
|---|
| Start bp | 3327459 |
|---|
| End bp | 3328346 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641643199 |
|---|
| Product | XRE family transcriptional regulator |
|---|
| Protein accession | YP_001769854 |
|---|
| Protein GI | 170741199 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.149161 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.119045 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGATCC GCCCGGATGA GATCGGCAAC CGGCTGCGCG CGTACCGGAT CGGGCAGGGC
CTGAGCGCGG AGCAGGTCGC GGAGCGCCTC GGCGTCTCGC GGGCGGCGGT CTACCGGATC
GAGGGCGGCG AGGTCGTCAA GGTCGAGACG CTCGAGCGCC TCGCCGCCCT CCTGAGCACC
ACTTTGGCCT CGCTGCTGGG CGCGGGCGTC GAGTACTACG CCAGCTCGAT CAGCTATTTC
GAGCGCATGC GTCAATTAGA AGAACAATGC GATCAAGTTG TTGCTCATTT TCCGCCCATG
TCATATCTGC TGACGTCAGA AAACTACTCG GCGTTCCTGA GAAAGACTTT GATCGAGGCA
TTGCCCTCGT ATGAGGCCGA ATCGTGCAGG GCCTGCTCCG AAATCGAGCA GATCGTGTCG
ATCCTCGATG AGCGCAAGGC CTTGCGCGAC CGCCGCCGGC TCAGCGTCAT CAACTTCGTG
GCGTTGCCGG AAATCGAGCG GTGGTTGAAG ATCGGCGTGG TCGGCCGGTT CGACTTGCCC
GCTTCCGAGG TGGTGAGGCG TCGACGGGTC GCGCGGGCCG AAGTCGAGCA CCTCCTCGGC
ATCATCGAGC GTGAGCCGAT GGGTATCCAG ATCGGCATCA TCAACGAGAT CCTGCCGAAC
ATGGCCTTTC AACTCTTCAG GGTGTCTGAC AGGACGCTGG TCGGGCTCAG CCCATTTCGC
CTGGGAGGCG ACCTTCCCAA CATCAAGACT GGCGTCGCCA TGGTAACGGA AGATAAACAA
CCGGTTCAAC TTTACGAGAA TATCGCGAAC GAGATCTGGA GTCGGGCCGC AAAGGGCGCG
ACGGCGGCGT CGCTCCTGAG GGCCGCGCTG GAGAGGTCGG CGATCTGA
|
|---|
| Protein sequence | MAIRPDEIGN RLRAYRIGQG LSAEQVAERL GVSRAAVYRI EGGEVVKVET LERLAALLST
TLASLLGAGV EYYASSISYF ERMRQLEEQC DQVVAHFPPM SYLLTSENYS AFLRKTLIEA
LPSYEAESCR ACSEIEQIVS ILDERKALRD RRRLSVINFV ALPEIERWLK IGVVGRFDLP
ASEVVRRRRV ARAEVEHLLG IIEREPMGIQ IGIINEILPN MAFQLFRVSD RTLVGLSPFR
LGGDLPNIKT GVAMVTEDKQ PVQLYENIAN EIWSRAAKGA TAASLLRAAL ERSAI
|
|---|
| |