Gene Aaci_1064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1064 
Symbol 
ID8424564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand- 
Start bp1132532 
End bp1133152 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content50% 
IMG OID645027182 
Producttranscriptional regulator, XRE family 
Protein accessionYP_003184490 
Protein GI258511056 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0300833 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACACTC TCAATTTCGG CGAATATCTG CGTTCTCTGC GCCTCGCGAG GAAACTGTCA 
ATTAACCAAC TCGCGGAAAA GACAGGGATT AGCGCAGCTC ATATTTCCCG GCTTGAAAGA 
AATGTTCGTG AAGTACCGAG ACCAGACACA TTGAGAAAAC TGGCGCTTGG GCTAGGAGTT 
CCATTCGATG AATTGTTACG CGCGGCGGGC TATTCCGAAG AGCAGTATGA ATACAACACA 
AAGGTGCTGT CGCGTCGACT ACAGCGTCTT CGCGAATCCA AAGGACTGTC GCTGTCGGAT 
GTTGCTCATA TAGCCGGTAT ATCCGAGGCC TATTTGGCTC GTTTAGAGTC CGCCGAAGGT 
CGGTTGCCTG GAGTTACAAC ACTGCACCGT TTAGCCCAGG TCTTCGACGT CACTCCAGCC 
TATTTGGTAG GCGATACACC GGATCCGAAG GACAATGGCC CTCTTGATGC GTGGTATCAG 
CCGAAAGACT TGATTCAGTG GCTAGAAGAA TCTGAAGTCA TGTTTGAAGG ACAGCCGCTC 
ACCGACGAAG ACAAACTCAA AATAAAGCAA ATCCTCGCAG TTGTATTCAT GGATGCTAAG 
CGCAAAAATC AGAGGCCGTA G
 
Protein sequence
MDTLNFGEYL RSLRLARKLS INQLAEKTGI SAAHISRLER NVREVPRPDT LRKLALGLGV 
PFDELLRAAG YSEEQYEYNT KVLSRRLQRL RESKGLSLSD VAHIAGISEA YLARLESAEG 
RLPGVTTLHR LAQVFDVTPA YLVGDTPDPK DNGPLDAWYQ PKDLIQWLEE SEVMFEGQPL 
TDEDKLKIKQ ILAVVFMDAK RKNQRP