Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4870 |
Symbol | |
ID | 4583431 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008688 |
Strand | - |
Start bp | 372730 |
End bp | 373365 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639772173 |
Product | XRE family transcriptional regulator |
Protein accession | YP_918626 |
Protein GI | 119387592 |
COG category | [K] Transcription |
COG ID | [COG1396] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.523431 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGATCG TGAACCAGAT TGGTGACATT GCAATGAGGC AGCGCCGCAC GGCCCGTCCC CGGCGGGAGC GGCCGCTGGA GCTTGGCCCG CGGCTGAAGG CGCTTCGCAA GGGCCAGCAG CTGACCTTGC AGGAGGTCGC GCGCCTGACC GGGGTATCGA CCTCGGCGCT GTCCAAGATC GAGCGCAACG ACCTTTCGCC GACGCTGACC ACCTTGCAGC GCATCGCCAG CGGCCTGCAG GTCGAGCTGT CGGCATTGCT GGGCGACGAG CCCGGCCACG CGCCCACCAC CGGCCGCCGC AGCATTGCCC GGGCCGGGCA GGGCGACAAC CTGAACAACG CCACCTGCAA CAACAAGCTG CTTTGCGCGG ATCTCAAGGA CAAGTGCTTC ACGCCCATCC GCACCGTGGT CAAGGCCCGC TCGCCCGAGG ATTACGAGGC ATGGGGCGTG TCGGATGGAG AGATCTTCCT GACCGTCCTC AAGGGTGAAC TGGTCATCCA CAGCCGGATC TATGAGCCGC TGGTGCTCTA TCCCGGCGAC AGCATGTATT ACGACGCCTC GACCGAGCAT TGCTGGACAT CGCAGGGCGA TGTCGACGCC GAACTGATCT GGGTGCTGGG CACGCGGACG GCCTGA
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Protein sequence | MPIVNQIGDI AMRQRRTARP RRERPLELGP RLKALRKGQQ LTLQEVARLT GVSTSALSKI ERNDLSPTLT TLQRIASGLQ VELSALLGDE PGHAPTTGRR SIARAGQGDN LNNATCNNKL LCADLKDKCF TPIRTVVKAR SPEDYEAWGV SDGEIFLTVL KGELVIHSRI YEPLVLYPGD SMYYDASTEH CWTSQGDVDA ELIWVLGTRT A
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