| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_1453 |
|---|
| Symbol | |
|---|
| ID | 9155602 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | - |
|---|
| Start bp | 1517288 |
|---|
| End bp | 1517803 |
|---|
| Gene Length | 516 bp |
|---|
| Protein Length | 171 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, XRE family |
|---|
| Protein accession | YP_003646419 |
|---|
| Protein GI | 296139176 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCTCCC CCGATGTCGG CGGCCGCCTG CGTGAGCTCC GCAGCGAACG CGGCCTCAGC
CTGTCCGAAC TCGCACGCCG CGCGGGCGTC GGCAAGGGAT CGCTATCCGA GATCGAAGCC
GGAGGTCGCA ACCCCACCGT CGAGACGCTC TACTCCCTCT GCGGCCCGCT CGATGTTCCG
CTCACCGCAT TGCTCGGCGA GTCCCCCGGA ACGGACAGCA CGGCACACGG CGGCATGCGG
ACGGTCCTGC TCTCGGTGCG GCACCTGCCG CACGTCACCG TCGAGGTCTT TCGCCTGGAG
TTCCCGGAGA GCTCAGATCA CACCTCGCCC GGCCACGGGC CAGCGGTCCG CGAGCACCTC
ACGCTGGTCG ACGGAGCCTT GCTCGTCGGT CCCGTCGGCG ACGAAACCGT GGTGCGGCAG
GGTGATTCAT GCATCTGGAC CAGCGACGGC CCACACCGCT TCGCCGCGAT CGACGGTCCT
GCCGAGGCCG TCGTCGTGAT CACGACGCCG CGTTAG
|
|---|
| Protein sequence | MPSPDVGGRL RELRSERGLS LSELARRAGV GKGSLSEIEA GGRNPTVETL YSLCGPLDVP
LTALLGESPG TDSTAHGGMR TVLLSVRHLP HVTVEVFRLE FPESSDHTSP GHGPAVREHL
TLVDGALLVG PVGDETVVRQ GDSCIWTSDG PHRFAAIDGP AEAVVVITTP R
|
|---|
| |