Gene Amir_3942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3942 
Symbol 
ID8328135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp4622296 
End bp4622889 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content75% 
IMG OID644944418 
Producttranscriptional regulator, XRE family 
Protein accessionYP_003101655 
Protein GI256377995 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.534044 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTCGACC AGATCCGCCC GGAGGTCGTG GTCCTCCTGG GCAACCGCAT CCGCGCGCTG 
CGCAAGGCCG CCGGGCTGAG CGTGGTGCGC CTGGCCGAGC TGAGCGGCGT CAGCAGGCGG 
ATGCTCACCC AGATCGAGCT GGGGCAGGCG AACCCGAGCC TGTCCACGGT GGACCGCGTG 
GCGTCCGCGC TGGGCACGAC CTTCTCCGCA CTGGCGGGCG TGCTGGGCGA CCCGCTGCCC 
GAGGGGGTCG AGGTGTGGTC CACGCCGGGC GGGAGCTGGG CGTACCTGGT GAACGCGGTG 
GAGACGGCGG AGGCGTCGAT CGAGCTGTGG AAGTGGCGGC TGCTCGGCGA CGACCGGTAC 
GGCGGCGTGG GCGGGACGCC GGGGACGCCG GACTCGATGG CGCACGTGCT GCGGGGCGAG 
CTGGTGGTCC GGCGGGGTGA GGTCGAGCTG CTGCGCGTGG CGGAGGGCGG GTCGGCTCGG 
CTGGCGAGCG CCGGGGGGCA CACGTTCGGC GCGGGGGGTG AGGTCGTGGA CTTCCTGTGG 
GTGCCGACCG TGCTCCGCGG TTCCACGCCA CCGCCCTCGC CGCCTCGCGC CTGA
 
Protein sequence
MVDQIRPEVV VLLGNRIRAL RKAAGLSVVR LAELSGVSRR MLTQIELGQA NPSLSTVDRV 
ASALGTTFSA LAGVLGDPLP EGVEVWSTPG GSWAYLVNAV ETAEASIELW KWRLLGDDRY 
GGVGGTPGTP DSMAHVLRGE LVVRRGEVEL LRVAEGGSAR LASAGGHTFG AGGEVVDFLW 
VPTVLRGSTP PPSPPRA