Gene Rxyl_2505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_2505 
Symbol 
ID4117091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand+ 
Start bp2520326 
End bp2520988 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content37% 
IMG OID638037280 
ProductXRE family transcriptional regulator 
Protein accessionYP_645238 
Protein GI108805301 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAGGA GGAGGCGGAT AATGAAATCC GCTAAAAATG ACAATAGAAG AGCCAACACT 
AGGCTAAATC CTGATCAATA TTTAGGAAAT TTTATTCGCA AATATCGATT AGAAAAAGGT 
TTAACTTTAT CCGATATTTC TGCGCGAGCC AGCATAAGCA AAAGCATGTT AAGCAAGATA 
GAAAATGGAC AAGCCTCTCC TAGTCTGCAT ACAATAGCGA GATTAGCACA AGCGTTAGGT 
GTAACACTTT CCACTATGTT TAGCAACTAT GATATTCCTT CTGACAATGC TCAATTAGTT 
AAAGCAGGTA AGGGAATGGA AGTTGTACGT AGAGGAACGA GAGAGGGTCA TACTTATCAT 
CTTCTAGCTT ATAACAAAGG ACCAAAACAA CTTTTTGAAC CTTTTTTGAT CACAATAAAA 
AATAAAAGTG AAACTTTTCC AACTTTTGAG CACACTGGTA TAGAGTTTAT TTACATGCTT 
GAAGGAAAAC TCAAATATCG TTACGGACAA TTCACCTATT TACTAGAACC GGGGGACGCG 
CTAACATTCC ATGGTGACAT TCCGCATGGA CCGGAGCAGT TAATAGATGT TCCAATTCGT 
TTTCTTGCTA TTATTAACTA CAATGTTTTT GATTCTGATG ATACAAATAG TCGTTCACAA 
TAG
 
Protein sequence
MERRRRIMKS AKNDNRRANT RLNPDQYLGN FIRKYRLEKG LTLSDISARA SISKSMLSKI 
ENGQASPSLH TIARLAQALG VTLSTMFSNY DIPSDNAQLV KAGKGMEVVR RGTREGHTYH 
LLAYNKGPKQ LFEPFLITIK NKSETFPTFE HTGIEFIYML EGKLKYRYGQ FTYLLEPGDA 
LTFHGDIPHG PEQLIDVPIR FLAIINYNVF DSDDTNSRSQ