25 homologs were found in PanDaTox collection
for query gene Francci3_2292 on replicon NC_007777
Organism: Frankia sp. CcI3



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007777  Francci3_2292  XRE family transcriptional regulator  100 
 
 		 92 aa  174  3e-43  Frankia sp. CcI3  Bacteria  hitchhiker  0.00214116  hitchhiker  0.0019025 
 
 
-
 
NC_013595  Sros_4445  putative transcriptional regulator, XRE family  77.03 
 
 		 84 aa  115  3e-25  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000092708  hitchhiker  0.000866745 
 
 
-
 
NC_013093  Amir_3439  transcriptional regulator, XRE family  71.43 
 
 		 86 aa  107  4.0000000000000004e-23  Actinosynnema mirum DSM 43827  Bacteria  hitchhiker  0.0000131898  n/a   
 
 
-
 
NC_013521  Sked_36440  Helix-turn-helix protein  71.62 
 
 		 92 aa  98.6  2e-20  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  0.809869 
 
 
-
 
NC_009664  Krad_1792  transcriptional regulator, XRE family  70.27 
 
 		 100 aa  96.7  1e-19  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009921  Franean1_1431  XRE family transcriptional regulator  68.92 
 
 		 100 aa  96.3  1e-19  Frankia sp. EAN1pec  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011886  Achl_2801  helix-turn-helix domain protein  68.92 
 
 		 99 aa  96.7  1e-19  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.0262398 
 
 
-
 
NC_008705  Mkms_3124  helix-turn-helix domain-containing protein  64.1 
 
 		 97 aa  94  6e-19  Mycobacterium sp. KMS  Bacteria  normal  1  normal  0.292105 
 
 
-
 
NC_009077  Mjls_3081  helix-turn-helix domain-containing protein  64.1 
 
 		 97 aa  94  6e-19  Mycobacterium sp. JLS  Bacteria  normal  1  normal  0.180494 
 
 
-
 
NC_008541  Arth_0869  XRE family transcriptional regulator  70 
 
 		 97 aa  92.4  2e-18  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_1534  transcriptional regulator, XRE family  71.08 
 
 		 85 aa  89.4  1e-17  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.146852  normal  1 
 
 
-
 
NC_008726  Mvan_0390  helix-turn-helix domain-containing protein  65.33 
 
 		 88 aa  89  2e-17  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  0.948584 
 
 
-
 
NC_013235  Namu_0990  transcriptional regulator, XRE family  66.22 
 
 		 91 aa  88.6  3e-17  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014210  Ndas_3220  helix-turn-helix domain protein  68.06 
 
 		 95 aa  87.4  6e-17  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014158  Tpau_2928  transcriptional regulator, XRE family  64.2 
 
 		 88 aa  84.3  5e-16  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.407893  n/a   
 
 
-
 
NC_009380  Strop_3774  helix-turn-helix domain-containing protein  59.74 
 
 		 88 aa  81.6  0.000000000000003  Salinispora tropica CNB-440  Bacteria  normal  1  normal  0.863863 
 
 
-
 
NC_009953  Sare_4156  XRE family transcriptional regulator  54.55 
 
 		 88 aa  76.6  0.0000000000001  Salinispora arenicola CNS-205  Bacteria  normal  0.384978  decreased coverage  0.00010611 
 
 
-
 
NC_009338  Mflv_0783  helix-turn-helix domain-containing protein  55.56 
 
 		 88 aa  75.1  0.0000000000003  Mycobacterium gilvum PYR-GCK  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013510  Tcur_4375  helix-turn-helix domain protein  60.67 
 
 		 92 aa  74.3  0.0000000000006  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_4952  putative transcriptional regulator, XRE family  53.33 
 
 		 89 aa  73.9  0.0000000000007  Streptosporangium roseum DSM 43021  Bacteria  normal  0.368473  normal  0.877055 
 
 
-
 
NC_013441  Gbro_2966  helix-turn-helix domain protein  59.38 
 
 		 86 aa  72.8  0.000000000001  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_014151  Cfla_1409  transcriptional regulator, XRE family  40.98 
 
 		 75 aa  43.5  0.001  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.503834  normal  1 
 
 
-
 
NC_012918  GM21_2298  transcriptional regulator, XRE family  35.09 
 
 		 138 aa  41.2  0.005  Geobacter sp. M21  Bacteria  n/a    normal  0.0522816 
 
 
-
 
NC_008148  Rxyl_2505  XRE family transcriptional regulator  33.33 
 
 		 220 aa  40.4  0.008  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_013205  Aaci_2386  transcriptional regulator, XRE family  41.67 
 
 		 159 aa  40.4  0.009  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.256982  n/a   
 
 
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