24 homologs were found in PanDaTox collection
for query gene Sare_4156 on replicon NC_009953
Organism: Salinispora arenicola CNS-205



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009953  Sare_4156  XRE family transcriptional regulator  100 
 
 		 88 aa  169  9e-42  Salinispora arenicola CNS-205  Bacteria  normal  0.384978  decreased coverage  0.00010611 
 
 
-
 
NC_009380  Strop_3774  helix-turn-helix domain-containing protein  89.77 
 
 		 88 aa  152  2e-36  Salinispora tropica CNB-440  Bacteria  normal  1  normal  0.863863 
 
 
-
 
NC_013595  Sros_4952  putative transcriptional regulator, XRE family  69.23 
 
 		 89 aa  108  3e-23  Streptosporangium roseum DSM 43021  Bacteria  normal  0.368473  normal  0.877055 
 
 
-
 
NC_014158  Tpau_2928  transcriptional regulator, XRE family  67.09 
 
 		 88 aa  96.3  1e-19  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.407893  n/a   
 
 
-
 
NC_008705  Mkms_3124  helix-turn-helix domain-containing protein  64.56 
 
 		 97 aa  95.1  3e-19  Mycobacterium sp. KMS  Bacteria  normal  1  normal  0.292105 
 
 
-
 
NC_008726  Mvan_0390  helix-turn-helix domain-containing protein  64 
 
 		 88 aa  94.7  3e-19  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  0.948584 
 
 
-
 
NC_009077  Mjls_3081  helix-turn-helix domain-containing protein  64.56 
 
 		 97 aa  95.1  3e-19  Mycobacterium sp. JLS  Bacteria  normal  1  normal  0.180494 
 
 
-
 
NC_009338  Mflv_0783  helix-turn-helix domain-containing protein  58.97 
 
 		 88 aa  89.4  1e-17  Mycobacterium gilvum PYR-GCK  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013441  Gbro_2966  helix-turn-helix domain protein  64.06 
 
 		 86 aa  82.4  0.000000000000002  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_014210  Ndas_3220  helix-turn-helix domain protein  56.76 
 
 		 95 aa  78.6  0.00000000000003  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013235  Namu_0990  transcriptional regulator, XRE family  52.7 
 
 		 91 aa  76.3  0.0000000000001  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013093  Amir_3439  transcriptional regulator, XRE family  51.25 
 
 		 86 aa  76.6  0.0000000000001  Actinosynnema mirum DSM 43827  Bacteria  hitchhiker  0.0000131898  n/a   
 
 
-
 
NC_009921  Franean1_1431  XRE family transcriptional regulator  48.65 
 
 		 100 aa  73.6  0.0000000000008  Frankia sp. EAN1pec  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013521  Sked_36440  Helix-turn-helix protein  48.65 
 
 		 92 aa  72.8  0.000000000001  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  0.809869 
 
 
-
 
NC_007777  Francci3_2292  XRE family transcriptional regulator  54.93 
 
 		 92 aa  72.4  0.000000000002  Frankia sp. CcI3  Bacteria  hitchhiker  0.00214116  hitchhiker  0.0019025 
 
 
-
 
NC_009664  Krad_1792  transcriptional regulator, XRE family  48.65 
 
 		 100 aa  72  0.000000000003  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_4445  putative transcriptional regulator, XRE family  51.35 
 
 		 84 aa  71.6  0.000000000003  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000092708  hitchhiker  0.000866745 
 
 
-
 
NC_011886  Achl_2801  helix-turn-helix domain protein  53.73 
 
 		 99 aa  71.6  0.000000000004  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.0262398 
 
 
-
 
NC_008541  Arth_0869  XRE family transcriptional regulator  49.25 
 
 		 97 aa  67.4  0.00000000006  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_1534  transcriptional regulator, XRE family  49.4 
 
 		 85 aa  60.8  0.000000006  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.146852  normal  1 
 
 
-
 
NC_013510  Tcur_4375  helix-turn-helix domain protein  56 
 
 		 92 aa  59.3  0.00000002  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_010505  Mrad2831_4811  XRE family transcriptional regulator  42.03 
 
 		 201 aa  46.6  0.0001  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  hitchhiker  0.00213383 
 
 
-
 
NC_008148  Rxyl_1009  XRE family transcriptional regulator  45.16 
 
 		 170 aa  44.3  0.0006  Rubrobacter xylanophilus DSM 9941  Bacteria  hitchhiker  0.000623644  n/a   
 
 
-
 
NC_013739  Cwoe_0107  transcriptional regulator, XRE family  32.18 
 
 		 93 aa  42  0.003  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  0.396345 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>