25 homologs were found in PanDaTox collection
for query gene Sros_4952 on replicon NC_013595
Organism: Streptosporangium roseum DSM 43021



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013595  Sros_4952  putative transcriptional regulator, XRE family  100 
 
 		 89 aa  176  9e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  0.368473  normal  0.877055 
 
 
-
 
NC_009953  Sare_4156  XRE family transcriptional regulator  69.23 
 
 		 88 aa  108  3e-23  Salinispora arenicola CNS-205  Bacteria  normal  0.384978  decreased coverage  0.00010611 
 
 
-
 
NC_009338  Mflv_0783  helix-turn-helix domain-containing protein  65.43 
 
 		 88 aa  107  6e-23  Mycobacterium gilvum PYR-GCK  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009380  Strop_3774  helix-turn-helix domain-containing protein  64.2 
 
 		 88 aa  101  3e-21  Salinispora tropica CNB-440  Bacteria  normal  1  normal  0.863863 
 
 
-
 
NC_014158  Tpau_2928  transcriptional regulator, XRE family  65.38 
 
 		 88 aa  95.5  2e-19  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.407893  n/a   
 
 
-
 
NC_008705  Mkms_3124  helix-turn-helix domain-containing protein  58.97 
 
 		 97 aa  90.5  6e-18  Mycobacterium sp. KMS  Bacteria  normal  1  normal  0.292105 
 
 
-
 
NC_009077  Mjls_3081  helix-turn-helix domain-containing protein  58.97 
 
 		 97 aa  90.5  6e-18  Mycobacterium sp. JLS  Bacteria  normal  1  normal  0.180494 
 
 
-
 
NC_013441  Gbro_2966  helix-turn-helix domain protein  68.75 
 
 		 86 aa  88.2  3e-17  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_008726  Mvan_0390  helix-turn-helix domain-containing protein  58.67 
 
 		 88 aa  85.5  2e-16  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  0.948584 
 
 
-
 
NC_009664  Krad_1792  transcriptional regulator, XRE family  53.01 
 
 		 100 aa  83.6  9e-16  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014210  Ndas_3220  helix-turn-helix domain protein  58.11 
 
 		 95 aa  82.4  0.000000000000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009921  Franean1_1431  XRE family transcriptional regulator  52.63 
 
 		 100 aa  82  0.000000000000003  Frankia sp. EAN1pec  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013521  Sked_36440  Helix-turn-helix protein  53.16 
 
 		 92 aa  80.9  0.000000000000006  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  0.809869 
 
 
-
 
NC_013235  Namu_0990  transcriptional regulator, XRE family  55.13 
 
 		 91 aa  80.5  0.000000000000008  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_4445  putative transcriptional regulator, XRE family  56.76 
 
 		 84 aa  77.8  0.00000000000004  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000092708  hitchhiker  0.000866745 
 
 
-
 
NC_011886  Achl_2801  helix-turn-helix domain protein  51.28 
 
 		 99 aa  77.4  0.00000000000005  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.0262398 
 
 
-
 
NC_013093  Amir_3439  transcriptional regulator, XRE family  52.7 
 
 		 86 aa  77.4  0.00000000000005  Actinosynnema mirum DSM 43827  Bacteria  hitchhiker  0.0000131898  n/a   
 
 
-
 
NC_007777  Francci3_2292  XRE family transcriptional regulator  54.17 
 
 		 92 aa  72.8  0.000000000001  Frankia sp. CcI3  Bacteria  hitchhiker  0.00214116  hitchhiker  0.0019025 
 
 
-
 
NC_008541  Arth_0869  XRE family transcriptional regulator  48.1 
 
 		 97 aa  72  0.000000000002  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_1534  transcriptional regulator, XRE family  58.11 
 
 		 85 aa  63.9  0.0000000007  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.146852  normal  1 
 
 
-
 
NC_013510  Tcur_4375  helix-turn-helix domain protein  45.12 
 
 		 92 aa  51.6  0.000004  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_010505  Mrad2831_4811  XRE family transcriptional regulator  40.91 
 
 		 201 aa  43.1  0.001  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  hitchhiker  0.00213383 
 
 
-
 
NC_011757  Mchl_2517  transcriptional regulator, XRE family  40.91 
 
 		 201 aa  42  0.003  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010725  Mpop_2198  transcriptional regulator, XRE family  40.91 
 
 		 201 aa  42  0.003  Methylobacterium populi BJ001  Bacteria  normal  0.351873  normal  1 
 
 
-
 
NC_010172  Mext_2242  helix-turn-helix domain-containing protein  40.91 
 
 		 201 aa  42  0.003  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  0.453871 
 
 
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