Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_3439 |
Symbol | |
ID | 8327629 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 4004049 |
End bp | 4004309 |
Gene Length | 261 bp |
Protein Length | 86 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644943942 |
Product | transcriptional regulator, XRE family |
Protein accession | YP_003101182 |
Protein GI | 256377522 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000131898 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGCGCC AGCCACTCAC CCAGTCGGAC CGCGAACGCG GTGAACGCCT CGGCGAACTC CTGCGCGCCG CGCGCGGCGA CCGCAGCATG TCCCAGATCG CCACCCACGC CGGCATCTCC GTCGAAACCC TGCGCAAGAT CGAACGGGGC CGCATCCCCA CCCCGGCGTT CTTCACCGTC GCCGCGCTCG CCGAAGCCGT GGGGCTGTCA CTCGACCAAC TGCACCGCGC ACTGCACACC GAACAGCGCC TGACCGCCTG A
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Protein sequence | MVRQPLTQSD RERGERLGEL LRAARGDRSM SQIATHAGIS VETLRKIERG RIPTPAFFTV AALAEAVGLS LDQLHRALHT EQRLTA
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