Gene Strop_3774 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3774 
Symbol 
ID5060252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4324701 
End bp4324967 
Gene Length267 bp 
Protein Length88 aa 
Translation table11 
GC content72% 
IMG OID640476032 
Producthelix-turn-helix domain-containing protein 
Protein accessionYP_001160583 
Protein GI145596286 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.863863 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCGCC AACCCCTGAC CGCCGAGCAG ATCGCCGCGG GTCAGCGCCT CGGAGTCGCC 
CTCCGGGCCG CACGGGCCGA CCGCAGTCTC GTCGAGGTGG CCCTGGCGGC CGGCATCTCC
CCCGAGACAC TACGCAAGAT CGAGTCAGGT CGTCTGCCCG CACCGGCGTT CGGCACCGTG
GTCCGCCTCA GCCGGGCCCT CGACGCCCCT CTCAGCGACC TGGCCGATGC CTGGCTGACC
AACCCGCCCA TCCGCCAGGC ATCCTGA
 
Protein sequence
MVRQPLTAEQ IAAGQRLGVA LRAARADRSL VEVALAAGIS PETLRKIESG RLPAPAFGTV 
VRLSRALDAP LSDLADAWLT NPPIRQAS