Gene Snas_1534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1534 
Symbol 
ID8882722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1619186 
End bp1619443 
Gene Length258 bp 
Protein Length85 aa 
Translation table11 
GC content73% 
IMG OID 
Producttranscriptional regulator, XRE family 
Protein accessionYP_003510331 
Protein GI291299053 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.146852 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCGTG AACCCCTGGG CCCGACCCAA CGCGAACGAG GAAACCGGCT GGGCGCGCTG 
CTGCGGCGAC GCCGCGGCGA CCGCAGCATG GTGGAGGTGG CCACGGCCGC CGGGATCTCG
GTGGAGACGC TGCGCAAGAT CGAGACCGGC CGCATCCCGA CCCCGGCGCT GTTCACGGTG
GCCGCGATCG CCGAGGTGCT GGGCGTCTCG CTGGACGAGC TGGTCCGCGA GTCGACCGCC
CAACCCGCCC CGCTGTAG
 
Protein sequence
MVREPLGPTQ RERGNRLGAL LRRRRGDRSM VEVATAAGIS VETLRKIETG RIPTPALFTV 
AAIAEVLGVS LDELVRESTA QPAPL