| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2292 |
|---|
| Symbol | |
|---|
| ID | 3904826 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 2672333 |
|---|
| End bp | 2672611 |
|---|
| Gene Length | 279 bp |
|---|
| Protein Length | 92 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 637879623 |
|---|
| Product | XRE family transcriptional regulator |
|---|
| Protein accession | YP_481389 |
|---|
| Protein GI | 86740989 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.00214116 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0019025 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCCATGG TGCGGACGCC GTTGACCCGG CTGGAACGCG AACGCGGGGA GCGGTTGGGC
GCCCTGCTGC GCACCGCCCG GGGGGACCGC AGCATGGTCG AGGTCGCCGC GGCGGCCGGG
CTGTCGGCGG AGACGCTGCG CAAGATCGAG ACGGGCCGGA TCGCGACCCC GGCGTTCTTC
ACCGTCGCCG CGCTGGCGCG GGTCCTCGGC CTGTCCCTGG ACCTGATCGC CGACGCCTGC
GCCGATGCGG CGATCCCGTC TGGCGTCGCA TGGGGCTGA
|
|---|
| Protein sequence | MAMVRTPLTR LERERGERLG ALLRTARGDR SMVEVAAAAG LSAETLRKIE TGRIATPAFF
TVAALARVLG LSLDLIADAC ADAAIPSGVA WG
|
|---|
| |