42 homologs were found in PanDaTox collection
for query gene Dtox_3625 on replicon NC_013216
Organism: Desulfotomaculum acetoxidans DSM 771



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013216  Dtox_3625  2-hydroxyglutaryl-CoA dehydratase D-component  100 
 
 		 325 aa  678    Desulfotomaculum acetoxidans DSM 771  Bacteria  unclonable  0.00000000225912  normal  0.25533 
 
 
-
 
NC_009253  Dred_2688  2-hydroxyglutaryl-CoA dehydratase, D-component  67.38 
 
 		 325 aa  490  1e-137  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.00668427  n/a   
 
 
-
 
NC_010424  Daud_1507  2-hydroxyglutaryl-CoA dehydratase, D-component  68.42 
 
 		 326 aa  477  1e-133  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  1  n/a   
 
 
-
 
NC_013385  Adeg_0480  2-hydroxyglutaryl-CoA dehydratase D-component  65.53 
 
 		 326 aa  443  1e-123  Ammonifex degensii KC4  Bacteria  normal  0.389098  n/a   
 
 
-
 
NC_011830  Dhaf_4399  2-hydroxyglutaryl-CoA dehydratase D-component  56.59 
 
 		 335 aa  414  1e-114  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.000000214001  n/a   
 
 
-
 
NC_009483  Gura_0485  2-hydroxyglutaryl-CoA dehydratase, D-component  57.1 
 
 		 333 aa  412  1e-114  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_0387  2-hydroxyglutaryl-CoA dehydratase D-component  56.79 
 
 		 327 aa  409  1e-113  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_002939  GSU2925  hypothetical protein  58.02 
 
 		 324 aa  407  1.0000000000000001e-112  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_007517  Gmet_0545  hypothetical protein  56.17 
 
 		 325 aa  400  9.999999999999999e-111  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011146  Gbem_0393  2-hydroxyglutaryl-CoA dehydratase D-component  55.86 
 
 		 327 aa  398  9.999999999999999e-111  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_008346  Swol_0450  hypothetical protein  56 
 
 		 325 aa  395  1e-109  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  1  n/a   
 
 
-
 
NC_007498  Pcar_2726  benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit  56.97 
 
 		 327 aa  391  1e-108  Pelobacter carbinolicus DSM 2380  Bacteria  normal  1  n/a   
 
 
-
 
NC_009012  Cthe_3103  2-hydroxyglutaryl-CoA dehydratase, D-component  53.07 
 
 		 328 aa  376  1e-103  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_013552  DhcVS_532  hypothetical protein  43.83 
 
 		 336 aa  289  4e-77  Dehalococcoides sp. VS  Bacteria  hitchhiker  0.00368182  n/a   
 
 
-
 
NC_009455  DehaBAV1_0566  2-hydroxyglutaryl-CoA dehydratase, D-component  44.14 
 
 		 339 aa  289  4e-77  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.00128016  n/a   
 
 
-
 
NC_002936  DET0591  hypothetical protein  43.83 
 
 		 339 aa  288  1e-76  Dehalococcoides ethenogenes 195  Bacteria  normal  0.114388  n/a   
 
 
-
 
NC_011661  Dtur_1747  2-hydroxyglutaryl-CoA dehydratase D-component  23.32 
 
 		 339 aa  56.2  0.0000007  Dictyoglomus turgidum DSM 6724  Bacteria  normal  1  n/a   
 
 
-
 
NC_009634  Mevan_1356  2-hydroxyglutaryl-CoA dehydratase D-component  23.96 
 
 		 373 aa  55.8  0.000001  Methanococcus vannielii SB  Archaea  normal  0.0888918  n/a   
 
 
-
 
NC_009635  Maeo_1346  2-hydroxyglutaryl-CoA dehydratase D-component  22.19 
 
 		 372 aa  55.8  0.000001  Methanococcus aeolicus Nankai-3  Archaea  normal  0.120946  n/a   
 
 
-
 
NC_008346  Swol_0410  (R)-2-hydroxyglutaryl-CoA dehydratase beta-subunit, putative  23.96 
 
 		 378 aa  53.9  0.000004  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.732282  n/a   
 
 
-
 
NC_009975  MmarC6_1821  2-hydroxyglutaryl-CoA dehydratase D-component  22.95 
 
 		 373 aa  53.1  0.000006  Methanococcus maripaludis C6  Archaea  normal  1  n/a   
 
 
-
 
NC_013517  Sterm_1694  2-hydroxyglutaryl-CoA dehydratase D-component  25.14 
 
 		 382 aa  52.8  0.000008  Sebaldella termitidis ATCC 33386  Bacteria  normal  1  n/a   
 
 
-
 
NC_009135  MmarC5_0834  2-hydroxyglutaryl-CoA dehydratase, D-component  22.95 
 
 		 373 aa  52.8  0.000008  Methanococcus maripaludis C5  Archaea  normal  1  n/a   
 
 
-
 
NC_009637  MmarC7_0081  2-hydroxyglutaryl-CoA dehydratase D-component  22.66 
 
 		 373 aa  52.8  0.000009  Methanococcus maripaludis C7  Archaea  hitchhiker  0.00790728  hitchhiker  0.00027984 
 
 
-
 
NC_007519  Dde_0090  2-hydroxyglutaryl-CoA dehydratase, beta subunit-like  23.08 
 
 		 426 aa  52  0.00001  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  1  n/a   
 
 
-
 
NC_013385  Adeg_0387  2-hydroxyglutaryl-CoA dehydratase D-component  25 
 
 		 426 aa  50.8  0.00003  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_011146  Gbem_2040  2-hydroxyglutaryl-CoA dehydratase D-component  23.8 
 
 		 401 aa  50.4  0.00004  Geobacter bemidjiensis Bem  Bacteria  normal  0.921137  n/a   
 
 
-
 
NC_013512  Sdel_2024  2-hydroxyglutaryl-CoA dehydratase D-component  24.73 
 
 		 439 aa  48.1  0.0002  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  1  n/a   
 
 
-
 
NC_009943  Dole_1685  2-hydroxyglutaryl-CoA dehydratase D-component  21.25 
 
 		 424 aa  47.4  0.0003  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00000455282  n/a   
 
 
-
 
NC_013216  Dtox_1465  2-hydroxyglutaryl-CoA dehydratase D-component  24.36 
 
 		 369 aa  47.4  0.0003  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008751  Dvul_0706  2-hydroxyglutaryl-CoA dehydratase, D-component  24.2 
 
 		 380 aa  47  0.0004  Desulfovibrio vulgaris DP4  Bacteria  normal  0.255737  normal  0.505258 
 
 
-
 
NC_010718  Nther_0828  2-hydroxyglutaryl-CoA dehydratase D-component  21.59 
 
 		 393 aa  46.2  0.0008  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  hitchhiker  0.0000331904 
 
 
-
 
NC_011830  Dhaf_3912  2-hydroxyglutaryl-CoA dehydratase D-component  21.31 
 
 		 384 aa  45.8  0.001  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_014150  Bmur_0617  2-hydroxyglutaryl-CoA dehydratase D-component  24.18 
 
 		 384 aa  45.4  0.001  Brachyspira murdochii DSM 12563  Bacteria  normal  1  n/a   
 
 
-
 
NC_013216  Dtox_2825  2-hydroxyglutaryl-CoA dehydratase D-component  23.21 
 
 		 368 aa  45.1  0.002  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002939  GSU2519  (R)-2-hydroxyglutaryl-CoA dehydratase beta-subunit, putative  24.72 
 
 		 387 aa  44.3  0.003  Geobacter sulfurreducens PCA  Bacteria  normal  0.321633  n/a   
 
 
-
 
NC_009253  Dred_1278  2-hydroxyglutaryl-CoA dehydratase, D-component  24.79 
 
 		 385 aa  43.9  0.004  Desulfotomaculum reducens MI-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011899  Hore_16080  2-hydroxyglutaryl-CoA dehydratase D-component  22.04 
 
 		 426 aa  43.1  0.006  Halothermothrix orenii H 168  Bacteria  normal  1  n/a   
 
 
-
 
NC_010718  Nther_1771  2-hydroxyglutaryl-CoA dehydratase D-component  20.05 
 
 		 419 aa  43.5  0.006  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  0.433973 
 
 
-
 
NC_009634  Mevan_1623  2-hydroxyglutaryl-CoA dehydratase D-component  28.93 
 
 		 373 aa  43.1  0.006  Methanococcus vannielii SB  Archaea  decreased coverage  0.000208392  n/a   
 
 
-
 
NC_007644  Moth_1007  2-hydroxyglutaryl-CoA dehydratase, D-component  35.94 
 
 		 349 aa  42.7  0.007  Moorella thermoacetica ATCC 39073  Bacteria  decreased coverage  0.0000000530359  hitchhiker  0.000167288 
 
 
-
 
NC_009975  MmarC6_0607  2-hydroxyglutaryl-CoA dehydratase D-component  22.68 
 
 		 373 aa  42.4  0.01  Methanococcus maripaludis C6  Archaea  normal  0.422107  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>