26 homologs were found in PanDaTox collection
for query gene Swol_0450 on replicon NC_008346
Organism: Syntrophomonas wolfei subsp. wolfei str. Goettingen



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008346  Swol_0450  hypothetical protein  100 
 
 		 325 aa  675    Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  1  n/a   
 
 
-
 
NC_007498  Pcar_2726  benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit  58.07 
 
 		 327 aa  414  1e-114  Pelobacter carbinolicus DSM 2380  Bacteria  normal  1  n/a   
 
 
-
 
NC_013216  Dtox_3625  2-hydroxyglutaryl-CoA dehydratase D-component  56 
 
 		 325 aa  395  1e-109  Desulfotomaculum acetoxidans DSM 771  Bacteria  unclonable  0.00000000225912  normal  0.25533 
 
 
-
 
NC_009483  Gura_0485  2-hydroxyglutaryl-CoA dehydratase, D-component  54.18 
 
 		 333 aa  396  1e-109  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_002939  GSU2925  hypothetical protein  55.42 
 
 		 324 aa  389  1e-107  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_010424  Daud_1507  2-hydroxyglutaryl-CoA dehydratase, D-component  56.66 
 
 		 326 aa  390  1e-107  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  1  n/a   
 
 
-
 
NC_009253  Dred_2688  2-hydroxyglutaryl-CoA dehydratase, D-component  56.31 
 
 		 325 aa  390  1e-107  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.00668427  n/a   
 
 
-
 
NC_013385  Adeg_0480  2-hydroxyglutaryl-CoA dehydratase D-component  56.21 
 
 		 326 aa  384  1e-105  Ammonifex degensii KC4  Bacteria  normal  0.389098  n/a   
 
 
-
 
NC_007517  Gmet_0545  hypothetical protein  54.8 
 
 		 325 aa  383  1e-105  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012918  GM21_0387  2-hydroxyglutaryl-CoA dehydratase D-component  51.85 
 
 		 327 aa  376  1e-103  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_011830  Dhaf_4399  2-hydroxyglutaryl-CoA dehydratase D-component  52.54 
 
 		 335 aa  365  1e-100  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.000000214001  n/a   
 
 
-
 
NC_011146  Gbem_0393  2-hydroxyglutaryl-CoA dehydratase D-component  51.23 
 
 		 327 aa  360  1e-98  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_009012  Cthe_3103  2-hydroxyglutaryl-CoA dehydratase, D-component  49.39 
 
 		 328 aa  339  2.9999999999999998e-92  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_009455  DehaBAV1_0566  2-hydroxyglutaryl-CoA dehydratase, D-component  44.89 
 
 		 339 aa  305  8.000000000000001e-82  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.00128016  n/a   
 
 
-
 
NC_013552  DhcVS_532  hypothetical protein  43.96 
 
 		 336 aa  300  2e-80  Dehalococcoides sp. VS  Bacteria  hitchhiker  0.00368182  n/a   
 
 
-
 
NC_002936  DET0591  hypothetical protein  43.65 
 
 		 339 aa  295  7e-79  Dehalococcoides ethenogenes 195  Bacteria  normal  0.114388  n/a   
 
 
-
 
NC_009975  MmarC6_1821  2-hydroxyglutaryl-CoA dehydratase D-component  25.21 
 
 		 373 aa  55.1  0.000001  Methanococcus maripaludis C6  Archaea  normal  1  n/a   
 
 
-
 
NC_009135  MmarC5_0834  2-hydroxyglutaryl-CoA dehydratase, D-component  24.36 
 
 		 373 aa  52.8  0.000009  Methanococcus maripaludis C5  Archaea  normal  1  n/a   
 
 
-
 
NC_009635  Maeo_1346  2-hydroxyglutaryl-CoA dehydratase D-component  24.72 
 
 		 372 aa  52.4  0.00001  Methanococcus aeolicus Nankai-3  Archaea  normal  0.120946  n/a   
 
 
-
 
NC_009637  MmarC7_0081  2-hydroxyglutaryl-CoA dehydratase D-component  24.78 
 
 		 373 aa  52  0.00001  Methanococcus maripaludis C7  Archaea  hitchhiker  0.00790728  hitchhiker  0.00027984 
 
 
-
 
NC_002939  GSU2944  (R)-2-hydroxyglutaryl-CoA dehydratase alpha-subunit, putative  24.1 
 
 		 431 aa  50.1  0.00005  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_009634  Mevan_1356  2-hydroxyglutaryl-CoA dehydratase D-component  26.05 
 
 		 373 aa  49.7  0.00007  Methanococcus vannielii SB  Archaea  normal  0.0888918  n/a   
 
 
-
 
NC_007644  Moth_1006  2-hydroxyglutaryl-CoA dehydratase, D-component  30.46 
 
 		 421 aa  48.1  0.0002  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0695891  hitchhiker  0.000177823 
 
 
-
 
NC_009634  Mevan_1623  2-hydroxyglutaryl-CoA dehydratase D-component  26.06 
 
 		 373 aa  46.2  0.0007  Methanococcus vannielii SB  Archaea  decreased coverage  0.000208392  n/a   
 
 
-
 
NC_014150  Bmur_0617  2-hydroxyglutaryl-CoA dehydratase D-component  24.38 
 
 		 384 aa  46.2  0.0008  Brachyspira murdochii DSM 12563  Bacteria  normal  1  n/a   
 
 
-
 
NC_009637  MmarC7_1346  2-hydroxyglutaryl-CoA dehydratase D-component  22.86 
 
 		 373 aa  42.7  0.008  Methanococcus maripaludis C7  Archaea  normal  0.922776  normal  0.0249494 
 
 
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