39 homologs were found in PanDaTox collection
for query gene Daud_1507 on replicon NC_010424
Organism: Candidatus Desulforudis audaxviator MP104C



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010424  Daud_1507  2-hydroxyglutaryl-CoA dehydratase, D-component  100 
 
 		 326 aa  667    Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  1  n/a   
 
 
-
 
NC_013216  Dtox_3625  2-hydroxyglutaryl-CoA dehydratase D-component  68.42 
 
 		 325 aa  477  1e-133  Desulfotomaculum acetoxidans DSM 771  Bacteria  unclonable  0.00000000225912  normal  0.25533 
 
 
-
 
NC_009253  Dred_2688  2-hydroxyglutaryl-CoA dehydratase, D-component  66.05 
 
 		 325 aa  468  1.0000000000000001e-131  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.00668427  n/a   
 
 
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NC_013385  Adeg_0480  2-hydroxyglutaryl-CoA dehydratase D-component  65.84 
 
 		 326 aa  444  1e-123  Ammonifex degensii KC4  Bacteria  normal  0.389098  n/a   
 
 
-
 
NC_002939  GSU2925  hypothetical protein  64.6 
 
 		 324 aa  426  1e-118  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_007517  Gmet_0545  hypothetical protein  61.92 
 
 		 325 aa  421  1e-116  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012918  GM21_0387  2-hydroxyglutaryl-CoA dehydratase D-component  60.06 
 
 		 327 aa  414  1e-114  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_009483  Gura_0485  2-hydroxyglutaryl-CoA dehydratase, D-component  59.01 
 
 		 333 aa  411  1e-114  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_011146  Gbem_0393  2-hydroxyglutaryl-CoA dehydratase D-component  59.75 
 
 		 327 aa  407  1.0000000000000001e-112  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_4399  2-hydroxyglutaryl-CoA dehydratase D-component  55.72 
 
 		 335 aa  403  1e-111  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.000000214001  n/a   
 
 
-
 
NC_007498  Pcar_2726  benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit  58.82 
 
 		 327 aa  397  1e-109  Pelobacter carbinolicus DSM 2380  Bacteria  normal  1  n/a   
 
 
-
 
NC_008346  Swol_0450  hypothetical protein  56.66 
 
 		 325 aa  390  1e-107  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  1  n/a   
 
 
-
 
NC_009012  Cthe_3103  2-hydroxyglutaryl-CoA dehydratase, D-component  52.62 
 
 		 328 aa  358  9e-98  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_002936  DET0591  hypothetical protein  44.17 
 
 		 339 aa  293  3e-78  Dehalococcoides ethenogenes 195  Bacteria  normal  0.114388  n/a   
 
 
-
 
NC_009455  DehaBAV1_0566  2-hydroxyglutaryl-CoA dehydratase, D-component  44.04 
 
 		 339 aa  289  5.0000000000000004e-77  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.00128016  n/a   
 
 
-
 
NC_013552  DhcVS_532  hypothetical protein  43.87 
 
 		 336 aa  288  1e-76  Dehalococcoides sp. VS  Bacteria  hitchhiker  0.00368182  n/a   
 
 
-
 
NC_009634  Mevan_1356  2-hydroxyglutaryl-CoA dehydratase D-component  24.93 
 
 		 373 aa  54.7  0.000002  Methanococcus vannielii SB  Archaea  normal  0.0888918  n/a   
 
 
-
 
NC_013385  Adeg_0387  2-hydroxyglutaryl-CoA dehydratase D-component  28.61 
 
 		 426 aa  55.1  0.000002  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_009975  MmarC6_1821  2-hydroxyglutaryl-CoA dehydratase D-component  23.12 
 
 		 373 aa  53.5  0.000004  Methanococcus maripaludis C6  Archaea  normal  1  n/a   
 
 
-
 
NC_009634  Mevan_1623  2-hydroxyglutaryl-CoA dehydratase D-component  23.28 
 
 		 373 aa  53.1  0.000006  Methanococcus vannielii SB  Archaea  decreased coverage  0.000208392  n/a   
 
 
-
 
NC_009135  MmarC5_0834  2-hydroxyglutaryl-CoA dehydratase, D-component  22.84 
 
 		 373 aa  52.8  0.000007  Methanococcus maripaludis C5  Archaea  normal  1  n/a   
 
 
-
 
NC_013512  Sdel_2024  2-hydroxyglutaryl-CoA dehydratase D-component  23.42 
 
 		 439 aa  52.8  0.000007  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  1  n/a   
 
 
-
 
NC_014150  Bmur_0617  2-hydroxyglutaryl-CoA dehydratase D-component  24.58 
 
 		 384 aa  52.8  0.000009  Brachyspira murdochii DSM 12563  Bacteria  normal  1  n/a   
 
 
-
 
NC_009637  MmarC7_0081  2-hydroxyglutaryl-CoA dehydratase D-component  23.12 
 
 		 373 aa  52.4  0.00001  Methanococcus maripaludis C7  Archaea  hitchhiker  0.00790728  hitchhiker  0.00027984 
 
 
-
 
NC_007519  Dde_0090  2-hydroxyglutaryl-CoA dehydratase, beta subunit-like  24.73 
 
 		 426 aa  51.6  0.00002  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  1  n/a   
 
 
-
 
NC_009635  Maeo_1346  2-hydroxyglutaryl-CoA dehydratase D-component  23.51 
 
 		 372 aa  50.4  0.00004  Methanococcus aeolicus Nankai-3  Archaea  normal  0.120946  n/a   
 
 
-
 
NC_009975  MmarC6_0607  2-hydroxyglutaryl-CoA dehydratase D-component  22.07 
 
 		 373 aa  48.9  0.0001  Methanococcus maripaludis C6  Archaea  normal  0.422107  n/a   
 
 
-
 
NC_009637  MmarC7_1346  2-hydroxyglutaryl-CoA dehydratase D-component  22.91 
 
 		 373 aa  48.1  0.0002  Methanococcus maripaludis C7  Archaea  normal  0.922776  normal  0.0249494 
 
 
-
 
NC_008346  Swol_0410  (R)-2-hydroxyglutaryl-CoA dehydratase beta-subunit, putative  25 
 
 		 378 aa  47.4  0.0003  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.732282  n/a   
 
 
-
 
NC_009135  MmarC5_1329  2-hydroxyglutaryl-CoA dehydratase, D-component  22.35 
 
 		 373 aa  45.4  0.001  Methanococcus maripaludis C5  Archaea  normal  0.360165  n/a   
 
 
-
 
NC_009801  EcE24377A_4937  putative 2-hydroxyglutaryl-CoA dehydratase, D-component  24.08 
 
 		 383 aa  44.3  0.003  Escherichia coli E24377A  Bacteria  normal  1  n/a   
 
 
-
 
NC_010498  EcSMS35_4882  putative 2-hydroxyglutaryl-CoA dehydratase, D-component  23.8 
 
 		 383 aa  43.9  0.004  Escherichia coli SMS-3-5  Bacteria  normal  0.30993  normal  0.992487 
 
 
-
 
NC_012892  B21_04167  hypothetical protein  23.8 
 
 		 383 aa  43.9  0.004  Escherichia coli BL21  Bacteria  normal  0.0394396  n/a   
 
 
-
 
NC_009800  EcHS_A4563  putative 2-hydroxyglutaryl-CoA dehydratase, D-component  23.8 
 
 		 383 aa  43.9  0.004  Escherichia coli HS  Bacteria  normal  1  n/a   
 
 
-
 
CP001509  ECD_04204  predicted 2-hydroxyglutaryl-CoA dehydratase  23.8 
 
 		 383 aa  43.9  0.004  Escherichia coli BL21(DE3)  Bacteria  normal  0.0605066  n/a   
 
 
-
 
CP001637  EcDH1_3660  2-hydroxyglutaryl-CoA dehydratase D-component  23.8 
 
 		 383 aa  43.9  0.004  Escherichia coli DH1  Bacteria  normal  0.814301  n/a   
 
 
-
 
NC_013517  Sterm_1694  2-hydroxyglutaryl-CoA dehydratase D-component  24.03 
 
 		 382 aa  43.5  0.005  Sebaldella termitidis ATCC 33386  Bacteria  normal  1  n/a   
 
 
-
 
NC_010468  EcolC_3728  2-hydroxyglutaryl-CoA dehydratase D-component  23.8 
 
 		 383 aa  42.7  0.008  Escherichia coli ATCC 8739  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011353  ECH74115_5849  putative 2-hydroxyglutaryl-CoA dehydratase, D-component  23.8 
 
 		 383 aa  42.7  0.009  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  1  normal  0.981774 
 
 
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