| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0410 |
|---|
| Symbol | |
|---|
| ID | 4281243 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | + |
|---|
| Start bp | 485913 |
|---|
| End bp | 487049 |
|---|
| Gene Length | 1137 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 638137298 |
|---|
| Product | (R)-2-hydroxyglutaryl-CoA dehydratase beta-subunit, putative |
|---|
| Protein accession | YP_753119 |
|---|
| Protein GI | 114565965 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1775] Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.732282 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAGACG AATTTATGCA AGGATTTGCC AGTGCCAGAG AAGTGAACCT ATTGCGTATA
AAAGAGGCCA AGGAGAATGG CAGAAAAGTA GTGGGAATTT ATTGCACTTA TTGCCCCCAG
GAACTAATTT TGGCGGCAGG AGCAATTCCA GTAGGGCTTT GCGGGATGAG TGAGAACCCT
ATAGCTGCTG CGGAGGAAAC TTTGCCGCGC AATCTCTGCC CTTTAATAAA ATCTTCTTAC
GGATTTGCGG CCACTGATAC CTGCCCATTC TTTCACTTTT CCGATTTAAT CGTTGGGGAA
ACCACCTGTG ACGGTAAAAA GAAGATGTTT GAAATTATGC AGGACTTGAA ACCGGTGCAC
GTTATGCAGC TTCCTCATCT TAATAACACT GAGGCATCAT TTGAACTGTG GGTGGAAGAA
GTACGGTGCT TGAAAAAACG CCTGGAAAAA GAATTGCAGG TTACCATAAG TGACCAGGAT
ATATGGAGGG CCGTAGAAGT TATCAACCAG GAAAAACAGG CAATTAAGGC CATGTTCGAT
CTGAATCGAG CTGATCCGCC ACCTCTAAGC GGGATGGAGA TGCTCACTGC TGCCTGGTCC
CGCAGCTTCA GTAGCGATAA AGGGGAGCTG ATCGACAACC TGAATGGACT GGTCCGGGAG
GTTGCCAATC AGACTAATAA CCGGCAAGTA AAGGCGCCAA GGGTACTGCT GACCGGCTGC
CCGGTGGGTC TGGGTACGGA AAAAGTTATC CGTCTGAGCG AAGAATTGGG AGCCTATATC
GTCGCCATGG AAAACTGCTC CGGCTACAAG ACCCTGGAAC TGCAGACTGC TACTAATGGC
GCGGATCCTA TTGTGGCTCT GGCAGAAAAA TATATGGCTA TACCCTGCTC CTGCATGAGC
CCCAATCCCT ACCGGCTGAA GTTAATAGAT AACATGATCG ATGATTTCCG GGTGGATGCG
GTTATCGACC TGACCTGGCA GGCTTGTCAT ACCTATAATA TTGAAGCTTT TGAAGTAGGC
AAACTGGTGA AGTCCAAGGG ACTTCCTTAT CTGCACCTTG AAAGTGACTA CTCCAATTCG
GACCTGGAGA GTCTCAAGGT TCGCATAGAA GCAATGCTGG AGATGGTAGA AAAATGA
|
|---|
| Protein sequence | MLDEFMQGFA SAREVNLLRI KEAKENGRKV VGIYCTYCPQ ELILAAGAIP VGLCGMSENP
IAAAEETLPR NLCPLIKSSY GFAATDTCPF FHFSDLIVGE TTCDGKKKMF EIMQDLKPVH
VMQLPHLNNT EASFELWVEE VRCLKKRLEK ELQVTISDQD IWRAVEVINQ EKQAIKAMFD
LNRADPPPLS GMEMLTAAWS RSFSSDKGEL IDNLNGLVRE VANQTNNRQV KAPRVLLTGC
PVGLGTEKVI RLSEELGAYI VAMENCSGYK TLELQTATNG ADPIVALAEK YMAIPCSCMS
PNPYRLKLID NMIDDFRVDA VIDLTWQACH TYNIEAFEVG KLVKSKGLPY LHLESDYSNS
DLESLKVRIE AMLEMVEK
|
|---|
| |