| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0566 |
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| Symbol | |
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| ID | 5131555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | - |
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| Start bp | 549740 |
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| End bp | 550759 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640529469 |
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| Product | 2-hydroxyglutaryl-CoA dehydratase, D-component |
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| Protein accession | YP_001214029 |
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| Protein GI | 147669211 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1775] Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00128016 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAAAATA ACGGACAAAA TAAATATATC GGCATCACTA CCACTGTACC CATAGAAATA
CTCCTTTCAG CAGGCTACAG CCCGCTGGAT CTGAATAATA TTTTTGTTTC AGACCCCAAG
TCTGACAGGC TTATCCGTCT GGCTGAAAAA GACGGCTTCC CTTTAAACTG CTGCGCTTGG
ATAAAAGGCA TCTATGGCGT CTGCCTTGAT AAGGGCATCA GCGAGGTTAT CTGCGTAACC
AGCGGTGACT GCTCAAATAC CCAGATGCTC AGGGAAGTTT TAAACCTGAA AGGCATCCGC
ACCATTCCCT TTGACTTCCC CACCGAACCT GACCCCGCAG AAGTAAAAGC CTCTCTTGCT
AAACTAGCCC TCAGGCTGAG CACTACTCTG GAAGCGGCTG ATGAATGGAG AAAAAGGCTT
TTACCCGCCA GAGAACTGGT ACATAAGCTG GACTATCTCT GTTATGCCGA TAATAAGGTC
TCGGGTTTTG AAAACCACTA CTGGCTGGTA TCCAGCTCAG ACTTTAACGG TGATTATGTA
AAGTACCAAG CCGAACTTCA AAAACTGTTG GACACAGTCC AGACCCGCAC ACCTTACCCT
GCGACAGAAT TGCGGCTGGC TTATCTGGGA GTGCCTTCGG TATTCGGTGA GGAGCTTTAC
CCCTACCTTG AGCAAAACGG AGCCAGAGTG GTATTTAATG AAATTCAGCG GCAGTTCAGT
CTGCCGAATG GCGGCGCTGA TATTTCGCAA TCCTACACCG CCTATACTTA CCCCTACCCT
ATGGAATATC GCCTTAGGGA TATACAGACC CAGCTTGCGG AGCGTAAGAT AGACGGCATA
ATCCATTACG TTCAGGCTTT CTGTCATCGG GCTATCGGTG ATATTATACT AAGGCAAAAA
CTGCCGCTTC CCATACTCAC GCTGGAAGGC AATGCGGATT TCGGTTTAAA TCAACATCAG
AAAACTCGGC TGGAGGCCTT TCTGGATATG CTGAAAGCCA AAAAGCAGAT GAATTTATAA
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| Protein sequence | MKNNGQNKYI GITTTVPIEI LLSAGYSPLD LNNIFVSDPK SDRLIRLAEK DGFPLNCCAW
IKGIYGVCLD KGISEVICVT SGDCSNTQML REVLNLKGIR TIPFDFPTEP DPAEVKASLA
KLALRLSTTL EAADEWRKRL LPARELVHKL DYLCYADNKV SGFENHYWLV SSSDFNGDYV
KYQAELQKLL DTVQTRTPYP ATELRLAYLG VPSVFGEELY PYLEQNGARV VFNEIQRQFS
LPNGGADISQ SYTAYTYPYP MEYRLRDIQT QLAERKIDGI IHYVQAFCHR AIGDIILRQK
LPLPILTLEG NADFGLNQHQ KTRLEAFLDM LKAKKQMNL
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