39 homologs were found in PanDaTox collection
for query gene Adeg_0480 on replicon NC_013385
Organism: Ammonifex degensii KC4



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013385  Adeg_0480  2-hydroxyglutaryl-CoA dehydratase D-component  100 
 
 		 326 aa  670    Ammonifex degensii KC4  Bacteria  normal  0.389098  n/a   
 
 
-
 
NC_009253  Dred_2688  2-hydroxyglutaryl-CoA dehydratase, D-component  64.91 
 
 		 325 aa  449  1e-125  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.00668427  n/a   
 
 
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NC_013216  Dtox_3625  2-hydroxyglutaryl-CoA dehydratase D-component  65.53 
 
 		 325 aa  443  1e-123  Desulfotomaculum acetoxidans DSM 771  Bacteria  unclonable  0.00000000225912  normal  0.25533 
 
 
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NC_010424  Daud_1507  2-hydroxyglutaryl-CoA dehydratase, D-component  65.84 
 
 		 326 aa  444  1e-123  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  1  n/a   
 
 
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NC_011830  Dhaf_4399  2-hydroxyglutaryl-CoA dehydratase D-component  60.73 
 
 		 335 aa  421  1e-117  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.000000214001  n/a   
 
 
-
 
NC_012918  GM21_0387  2-hydroxyglutaryl-CoA dehydratase D-component  61.49 
 
 		 327 aa  408  1e-113  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_002939  GSU2925  hypothetical protein  60.06 
 
 		 324 aa  402  1e-111  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_009483  Gura_0485  2-hydroxyglutaryl-CoA dehydratase, D-component  59.75 
 
 		 333 aa  398  9.999999999999999e-111  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_007498  Pcar_2726  benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit  58.64 
 
 		 327 aa  400  9.999999999999999e-111  Pelobacter carbinolicus DSM 2380  Bacteria  normal  1  n/a   
 
 
-
 
NC_007517  Gmet_0545  hypothetical protein  58.51 
 
 		 325 aa  394  1e-108  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011146  Gbem_0393  2-hydroxyglutaryl-CoA dehydratase D-component  60.56 
 
 		 327 aa  393  1e-108  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_008346  Swol_0450  hypothetical protein  56.21 
 
 		 325 aa  384  1e-105  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  1  n/a   
 
 
-
 
NC_009012  Cthe_3103  2-hydroxyglutaryl-CoA dehydratase, D-component  51.38 
 
 		 328 aa  355  5e-97  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_013552  DhcVS_532  hypothetical protein  44 
 
 		 336 aa  289  4e-77  Dehalococcoides sp. VS  Bacteria  hitchhiker  0.00368182  n/a   
 
 
-
 
NC_002936  DET0591  hypothetical protein  43.38 
 
 		 339 aa  286  2.9999999999999996e-76  Dehalococcoides ethenogenes 195  Bacteria  normal  0.114388  n/a   
 
 
-
 
NC_009455  DehaBAV1_0566  2-hydroxyglutaryl-CoA dehydratase, D-component  43.69 
 
 		 339 aa  285  5.999999999999999e-76  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.00128016  n/a   
 
 
-
 
NC_009634  Mevan_1356  2-hydroxyglutaryl-CoA dehydratase D-component  24.65 
 
 		 373 aa  58.9  0.0000001  Methanococcus vannielii SB  Archaea  normal  0.0888918  n/a   
 
 
-
 
NC_009135  MmarC5_0834  2-hydroxyglutaryl-CoA dehydratase, D-component  23.98 
 
 		 373 aa  54.7  0.000002  Methanococcus maripaludis C5  Archaea  normal  1  n/a   
 
 
-
 
NC_009635  Maeo_1346  2-hydroxyglutaryl-CoA dehydratase D-component  23.63 
 
 		 372 aa  55.1  0.000002  Methanococcus aeolicus Nankai-3  Archaea  normal  0.120946  n/a   
 
 
-
 
NC_009975  MmarC6_1821  2-hydroxyglutaryl-CoA dehydratase D-component  23.91 
 
 		 373 aa  54.3  0.000003  Methanococcus maripaludis C6  Archaea  normal  1  n/a   
 
 
-
 
NC_009637  MmarC7_0081  2-hydroxyglutaryl-CoA dehydratase D-component  23.68 
 
 		 373 aa  53.5  0.000005  Methanococcus maripaludis C7  Archaea  hitchhiker  0.00790728  hitchhiker  0.00027984 
 
 
-
 
NC_013512  Sdel_2024  2-hydroxyglutaryl-CoA dehydratase D-component  24.86 
 
 		 439 aa  52  0.00001  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  1  n/a   
 
 
-
 
NC_009634  Mevan_1623  2-hydroxyglutaryl-CoA dehydratase D-component  30.99 
 
 		 373 aa  52  0.00001  Methanococcus vannielii SB  Archaea  decreased coverage  0.000208392  n/a   
 
 
-
 
NC_013385  Adeg_0387  2-hydroxyglutaryl-CoA dehydratase D-component  25.63 
 
 		 426 aa  51.2  0.00003  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_013522  Taci_0254  2-hydroxyglutaryl-CoA dehydratase D-component  28.02 
 
 		 423 aa  47.8  0.0003  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  1  n/a   
 
 
-
 
NC_007644  Moth_1418  2-hydroxyglutaryl-CoA dehydratase, D-component  28.65 
 
 		 436 aa  47.4  0.0004  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.00133287  normal  0.906732 
 
 
-
 
NC_007519  Dde_0090  2-hydroxyglutaryl-CoA dehydratase, beta subunit-like  22.63 
 
 		 426 aa  47  0.0005  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  1  n/a   
 
 
-
 
NC_009637  MmarC7_1346  2-hydroxyglutaryl-CoA dehydratase D-component  22.51 
 
 		 373 aa  46.2  0.0007  Methanococcus maripaludis C7  Archaea  normal  0.922776  normal  0.0249494 
 
 
-
 
NC_007644  Moth_1006  2-hydroxyglutaryl-CoA dehydratase, D-component  26.47 
 
 		 421 aa  46.2  0.0008  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0695891  hitchhiker  0.000177823 
 
 
-
 
NC_007644  Moth_1007  2-hydroxyglutaryl-CoA dehydratase, D-component  36.92 
 
 		 349 aa  45.4  0.001  Moorella thermoacetica ATCC 39073  Bacteria  decreased coverage  0.0000000530359  hitchhiker  0.000167288 
 
 
-
 
NC_009135  MmarC5_1329  2-hydroxyglutaryl-CoA dehydratase, D-component  22.73 
 
 		 373 aa  44.7  0.002  Methanococcus maripaludis C5  Archaea  normal  0.360165  n/a   
 
 
-
 
NC_011769  DvMF_0986  2-hydroxyglutaryl-CoA dehydratase D-component  24.16 
 
 		 379 aa  44.7  0.002  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.345407 
 
 
-
 
NC_008554  Sfum_3161  2-hydroxyglutaryl-CoA dehydratase, D-component  22.28 
 
 		 382 aa  43.9  0.003  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002939  GSU2519  (R)-2-hydroxyglutaryl-CoA dehydratase beta-subunit, putative  24.15 
 
 		 387 aa  44.3  0.003  Geobacter sulfurreducens PCA  Bacteria  normal  0.321633  n/a   
 
 
-
 
NC_008554  Sfum_3256  2-hydroxyglutaryl-CoA dehydratase, D-component  24.84 
 
 		 423 aa  43.9  0.004  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011146  Gbem_2040  2-hydroxyglutaryl-CoA dehydratase D-component  25.28 
 
 		 401 aa  43.9  0.004  Geobacter bemidjiensis Bem  Bacteria  normal  0.921137  n/a   
 
 
-
 
NC_011830  Dhaf_3912  2-hydroxyglutaryl-CoA dehydratase D-component  24.79 
 
 		 384 aa  43.1  0.006  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_009975  MmarC6_0607  2-hydroxyglutaryl-CoA dehydratase D-component  21.94 
 
 		 373 aa  42.7  0.008  Methanococcus maripaludis C6  Archaea  normal  0.422107  n/a   
 
 
-
 
NC_011661  Dtur_1746  2-hydroxyglutaryl-CoA dehydratase D-component  29.79 
 
 		 408 aa  42.4  0.01  Dictyoglomus turgidum DSM 6724  Bacteria  normal  1  n/a   
 
 
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