28 homologs were found in PanDaTox collection
for query gene Gmet_0545 on replicon NC_007517
Organism: Geobacter metallireducens GS-15



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007517  Gmet_0545  hypothetical protein  100 
 
 		 325 aa  674    Geobacter metallireducens GS-15  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002939  GSU2925  hypothetical protein  83.33 
 
 		 324 aa  573  1.0000000000000001e-162  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_009483  Gura_0485  2-hydroxyglutaryl-CoA dehydratase, D-component  71.91 
 
 		 333 aa  515  1.0000000000000001e-145  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_0387  2-hydroxyglutaryl-CoA dehydratase D-component  66.56 
 
 		 327 aa  468  1.0000000000000001e-131  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_011146  Gbem_0393  2-hydroxyglutaryl-CoA dehydratase D-component  66.25 
 
 		 327 aa  452  1.0000000000000001e-126  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_007498  Pcar_2726  benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit  65.63 
 
 		 327 aa  446  1.0000000000000001e-124  Pelobacter carbinolicus DSM 2380  Bacteria  normal  1  n/a   
 
 
-
 
NC_010424  Daud_1507  2-hydroxyglutaryl-CoA dehydratase, D-component  61.92 
 
 		 326 aa  421  1e-116  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  1  n/a   
 
 
-
 
NC_009253  Dred_2688  2-hydroxyglutaryl-CoA dehydratase, D-component  58.64 
 
 		 325 aa  410  1e-113  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.00668427  n/a   
 
 
-
 
NC_013216  Dtox_3625  2-hydroxyglutaryl-CoA dehydratase D-component  56.17 
 
 		 325 aa  400  9.999999999999999e-111  Desulfotomaculum acetoxidans DSM 771  Bacteria  unclonable  0.00000000225912  normal  0.25533 
 
 
-
 
NC_013385  Adeg_0480  2-hydroxyglutaryl-CoA dehydratase D-component  58.51 
 
 		 326 aa  394  1e-108  Ammonifex degensii KC4  Bacteria  normal  0.389098  n/a   
 
 
-
 
NC_011830  Dhaf_4399  2-hydroxyglutaryl-CoA dehydratase D-component  54.35 
 
 		 335 aa  385  1e-106  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.000000214001  n/a   
 
 
-
 
NC_008346  Swol_0450  hypothetical protein  54.8 
 
 		 325 aa  383  1e-105  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  1  n/a   
 
 
-
 
NC_009012  Cthe_3103  2-hydroxyglutaryl-CoA dehydratase, D-component  49.69 
 
 		 328 aa  342  5e-93  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_009455  DehaBAV1_0566  2-hydroxyglutaryl-CoA dehydratase, D-component  48.14 
 
 		 339 aa  328  1.0000000000000001e-88  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.00128016  n/a   
 
 
-
 
NC_013552  DhcVS_532  hypothetical protein  48.14 
 
 		 336 aa  325  5e-88  Dehalococcoides sp. VS  Bacteria  hitchhiker  0.00368182  n/a   
 
 
-
 
NC_002936  DET0591  hypothetical protein  47.83 
 
 		 339 aa  323  3e-87  Dehalococcoides ethenogenes 195  Bacteria  normal  0.114388  n/a   
 
 
-
 
NC_009634  Mevan_1356  2-hydroxyglutaryl-CoA dehydratase D-component  24.5 
 
 		 373 aa  62  0.00000001  Methanococcus vannielii SB  Archaea  normal  0.0888918  n/a   
 
 
-
 
NC_007644  Moth_1418  2-hydroxyglutaryl-CoA dehydratase, D-component  23.37 
 
 		 436 aa  50.4  0.00004  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.00133287  normal  0.906732 
 
 
-
 
NC_013512  Sdel_2024  2-hydroxyglutaryl-CoA dehydratase D-component  22.31 
 
 		 439 aa  48.1  0.0002  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  1  n/a   
 
 
-
 
NC_013522  Taci_0254  2-hydroxyglutaryl-CoA dehydratase D-component  23.18 
 
 		 423 aa  48.5  0.0002  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  1  n/a   
 
 
-
 
NC_013216  Dtox_1465  2-hydroxyglutaryl-CoA dehydratase D-component  24.59 
 
 		 369 aa  46.6  0.0006  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009635  Maeo_1346  2-hydroxyglutaryl-CoA dehydratase D-component  20.4 
 
 		 372 aa  45.8  0.001  Methanococcus aeolicus Nankai-3  Archaea  normal  0.120946  n/a   
 
 
-
 
NC_009135  MmarC5_1329  2-hydroxyglutaryl-CoA dehydratase, D-component  21.2 
 
 		 373 aa  44.3  0.003  Methanococcus maripaludis C5  Archaea  normal  0.360165  n/a   
 
 
-
 
NC_007575  Suden_0273  2-hydroxyglutaryl-CoA dehydratase, D-component  21.93 
 
 		 422 aa  43.9  0.004  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  1  n/a   
 
 
-
 
NC_009135  MmarC5_0834  2-hydroxyglutaryl-CoA dehydratase, D-component  21.43 
 
 		 373 aa  43.5  0.005  Methanococcus maripaludis C5  Archaea  normal  1  n/a   
 
 
-
 
NC_007644  Moth_1006  2-hydroxyglutaryl-CoA dehydratase, D-component  26.14 
 
 		 421 aa  43.5  0.005  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0695891  hitchhiker  0.000177823 
 
 
-
 
NC_009943  Dole_1685  2-hydroxyglutaryl-CoA dehydratase D-component  21.31 
 
 		 424 aa  42.7  0.009  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00000455282  n/a   
 
 
-
 
NC_007519  Dde_0090  2-hydroxyglutaryl-CoA dehydratase, beta subunit-like  24.33 
 
 		 426 aa  42.7  0.009  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  1  n/a   
 
 
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