31 homologs were found in PanDaTox collection
for query gene Dred_2688 on replicon NC_009253
Organism: Desulfotomaculum reducens MI-1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009253  Dred_2688  2-hydroxyglutaryl-CoA dehydratase, D-component  100 
 
 		 325 aa  675    Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.00668427  n/a   
 
 
-
 
NC_013216  Dtox_3625  2-hydroxyglutaryl-CoA dehydratase D-component  67.38 
 
 		 325 aa  490  1e-137  Desulfotomaculum acetoxidans DSM 771  Bacteria  unclonable  0.00000000225912  normal  0.25533 
 
 
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NC_010424  Daud_1507  2-hydroxyglutaryl-CoA dehydratase, D-component  66.05 
 
 		 326 aa  468  1.0000000000000001e-131  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  1  n/a   
 
 
-
 
NC_013385  Adeg_0480  2-hydroxyglutaryl-CoA dehydratase D-component  64.91 
 
 		 326 aa  449  1e-125  Ammonifex degensii KC4  Bacteria  normal  0.389098  n/a   
 
 
-
 
NC_011830  Dhaf_4399  2-hydroxyglutaryl-CoA dehydratase D-component  61.38 
 
 		 335 aa  449  1e-125  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.000000214001  n/a   
 
 
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NC_012918  GM21_0387  2-hydroxyglutaryl-CoA dehydratase D-component  58.64 
 
 		 327 aa  428  1e-119  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_011146  Gbem_0393  2-hydroxyglutaryl-CoA dehydratase D-component  58.33 
 
 		 327 aa  419  1e-116  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_002939  GSU2925  hypothetical protein  58.95 
 
 		 324 aa  410  1e-113  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_007517  Gmet_0545  hypothetical protein  58.64 
 
 		 325 aa  410  1e-113  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009483  Gura_0485  2-hydroxyglutaryl-CoA dehydratase, D-component  56.48 
 
 		 333 aa  409  1e-113  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_007498  Pcar_2726  benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit  56.66 
 
 		 327 aa  394  1e-108  Pelobacter carbinolicus DSM 2380  Bacteria  normal  1  n/a   
 
 
-
 
NC_008346  Swol_0450  hypothetical protein  56.31 
 
 		 325 aa  390  1e-107  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  1  n/a   
 
 
-
 
NC_009012  Cthe_3103  2-hydroxyglutaryl-CoA dehydratase, D-component  50 
 
 		 328 aa  366  1e-100  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_009455  DehaBAV1_0566  2-hydroxyglutaryl-CoA dehydratase, D-component  45.09 
 
 		 339 aa  293  2e-78  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.00128016  n/a   
 
 
-
 
NC_013552  DhcVS_532  hypothetical protein  43.52 
 
 		 336 aa  289  5.0000000000000004e-77  Dehalococcoides sp. VS  Bacteria  hitchhiker  0.00368182  n/a   
 
 
-
 
NC_002936  DET0591  hypothetical protein  44.14 
 
 		 339 aa  287  2e-76  Dehalococcoides ethenogenes 195  Bacteria  normal  0.114388  n/a   
 
 
-
 
NC_009634  Mevan_1356  2-hydroxyglutaryl-CoA dehydratase D-component  24.58 
 
 		 373 aa  53.9  0.000004  Methanococcus vannielii SB  Archaea  normal  0.0888918  n/a   
 
 
-
 
NC_009635  Maeo_1346  2-hydroxyglutaryl-CoA dehydratase D-component  22.44 
 
 		 372 aa  53.1  0.000006  Methanococcus aeolicus Nankai-3  Archaea  normal  0.120946  n/a   
 
 
-
 
NC_013385  Adeg_0387  2-hydroxyglutaryl-CoA dehydratase D-component  25.21 
 
 		 426 aa  49.7  0.00006  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_009975  MmarC6_1821  2-hydroxyglutaryl-CoA dehydratase D-component  23.5 
 
 		 373 aa  49.3  0.00008  Methanococcus maripaludis C6  Archaea  normal  1  n/a   
 
 
-
 
NC_009637  MmarC7_0081  2-hydroxyglutaryl-CoA dehydratase D-component  23.43 
 
 		 373 aa  48.9  0.0001  Methanococcus maripaludis C7  Archaea  hitchhiker  0.00790728  hitchhiker  0.00027984 
 
 
-
 
NC_009634  Mevan_1623  2-hydroxyglutaryl-CoA dehydratase D-component  27.86 
 
 		 373 aa  48.9  0.0001  Methanococcus vannielii SB  Archaea  decreased coverage  0.000208392  n/a   
 
 
-
 
NC_009135  MmarC5_0834  2-hydroxyglutaryl-CoA dehydratase, D-component  23.21 
 
 		 373 aa  48.5  0.0001  Methanococcus maripaludis C5  Archaea  normal  1  n/a   
 
 
-
 
NC_010718  Nther_0828  2-hydroxyglutaryl-CoA dehydratase D-component  21.69 
 
 		 393 aa  46.2  0.0007  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  hitchhiker  0.0000331904 
 
 
-
 
NC_007519  Dde_0090  2-hydroxyglutaryl-CoA dehydratase, beta subunit-like  23.9 
 
 		 426 aa  46.2  0.0009  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  1  n/a   
 
 
-
 
NC_009637  MmarC7_1346  2-hydroxyglutaryl-CoA dehydratase D-component  21.97 
 
 		 373 aa  44.7  0.002  Methanococcus maripaludis C7  Archaea  normal  0.922776  normal  0.0249494 
 
 
-
 
NC_011146  Gbem_2040  2-hydroxyglutaryl-CoA dehydratase D-component  26.35 
 
 		 401 aa  44.7  0.002  Geobacter bemidjiensis Bem  Bacteria  normal  0.921137  n/a   
 
 
-
 
NC_007644  Moth_1418  2-hydroxyglutaryl-CoA dehydratase, D-component  27.95 
 
 		 436 aa  44.7  0.002  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.00133287  normal  0.906732 
 
 
-
 
NC_011661  Dtur_1747  2-hydroxyglutaryl-CoA dehydratase D-component  22.94 
 
 		 339 aa  44.3  0.003  Dictyoglomus turgidum DSM 6724  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_3912  2-hydroxyglutaryl-CoA dehydratase D-component  22.91 
 
 		 384 aa  43.9  0.003  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_013517  Sterm_1694  2-hydroxyglutaryl-CoA dehydratase D-component  24.16 
 
 		 382 aa  43.5  0.005  Sebaldella termitidis ATCC 33386  Bacteria  normal  1  n/a   
 
 
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