29 homologs were found in PanDaTox collection
for query gene GSU2925 on replicon NC_002939
Organism: Geobacter sulfurreducens PCA



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_002939  GSU2925  hypothetical protein  100 
 
 		 324 aa  667    Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
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NC_007517  Gmet_0545  hypothetical protein  83.33 
 
 		 325 aa  573  1.0000000000000001e-162  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  1 
 
 
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NC_009483  Gura_0485  2-hydroxyglutaryl-CoA dehydratase, D-component  73.46 
 
 		 333 aa  516  1.0000000000000001e-145  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
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NC_012918  GM21_0387  2-hydroxyglutaryl-CoA dehydratase D-component  68.42 
 
 		 327 aa  476  1e-133  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
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NC_011146  Gbem_0393  2-hydroxyglutaryl-CoA dehydratase D-component  67.8 
 
 		 327 aa  463  1e-129  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
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NC_007498  Pcar_2726  benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit  65.11 
 
 		 327 aa  439  9.999999999999999e-123  Pelobacter carbinolicus DSM 2380  Bacteria  normal  1  n/a   
 
 
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NC_010424  Daud_1507  2-hydroxyglutaryl-CoA dehydratase, D-component  64.6 
 
 		 326 aa  426  1e-118  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  1  n/a   
 
 
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NC_009253  Dred_2688  2-hydroxyglutaryl-CoA dehydratase, D-component  58.95 
 
 		 325 aa  410  1e-113  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.00668427  n/a   
 
 
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NC_013216  Dtox_3625  2-hydroxyglutaryl-CoA dehydratase D-component  58.02 
 
 		 325 aa  407  1.0000000000000001e-112  Desulfotomaculum acetoxidans DSM 771  Bacteria  unclonable  0.00000000225912  normal  0.25533 
 
 
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NC_013385  Adeg_0480  2-hydroxyglutaryl-CoA dehydratase D-component  60.06 
 
 		 326 aa  402  1e-111  Ammonifex degensii KC4  Bacteria  normal  0.389098  n/a   
 
 
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NC_008346  Swol_0450  hypothetical protein  55.42 
 
 		 325 aa  389  1e-107  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_4399  2-hydroxyglutaryl-CoA dehydratase D-component  53.75 
 
 		 335 aa  381  1e-105  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.000000214001  n/a   
 
 
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NC_009012  Cthe_3103  2-hydroxyglutaryl-CoA dehydratase, D-component  52.15 
 
 		 328 aa  357  1.9999999999999998e-97  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_009455  DehaBAV1_0566  2-hydroxyglutaryl-CoA dehydratase, D-component  49.07 
 
 		 339 aa  330  2e-89  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.00128016  n/a   
 
 
-
 
NC_013552  DhcVS_532  hypothetical protein  48.45 
 
 		 336 aa  325  5e-88  Dehalococcoides sp. VS  Bacteria  hitchhiker  0.00368182  n/a   
 
 
-
 
NC_002936  DET0591  hypothetical protein  48.14 
 
 		 339 aa  322  6e-87  Dehalococcoides ethenogenes 195  Bacteria  normal  0.114388  n/a   
 
 
-
 
NC_009634  Mevan_1356  2-hydroxyglutaryl-CoA dehydratase D-component  25.57 
 
 		 373 aa  61.6  0.00000002  Methanococcus vannielii SB  Archaea  normal  0.0888918  n/a   
 
 
-
 
NC_009635  Maeo_1346  2-hydroxyglutaryl-CoA dehydratase D-component  21.81 
 
 		 372 aa  56.2  0.0000007  Methanococcus aeolicus Nankai-3  Archaea  normal  0.120946  n/a   
 
 
-
 
NC_009135  MmarC5_1329  2-hydroxyglutaryl-CoA dehydratase, D-component  22.35 
 
 		 373 aa  47.4  0.0003  Methanococcus maripaludis C5  Archaea  normal  0.360165  n/a   
 
 
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NC_013522  Taci_0254  2-hydroxyglutaryl-CoA dehydratase D-component  24.72 
 
 		 423 aa  47.4  0.0004  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  1  n/a   
 
 
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NC_013385  Adeg_0387  2-hydroxyglutaryl-CoA dehydratase D-component  24.73 
 
 		 426 aa  46.2  0.0007  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_011146  Gbem_2040  2-hydroxyglutaryl-CoA dehydratase D-component  24.93 
 
 		 401 aa  46.2  0.0008  Geobacter bemidjiensis Bem  Bacteria  normal  0.921137  n/a   
 
 
-
 
NC_009637  MmarC7_1346  2-hydroxyglutaryl-CoA dehydratase D-component  22.25 
 
 		 373 aa  45.8  0.001  Methanococcus maripaludis C7  Archaea  normal  0.922776  normal  0.0249494 
 
 
-
 
NC_007925  RPC_2055  2-hydroxyglutaryl-CoA dehydratase, D-component  23.73 
 
 		 376 aa  45.4  0.001  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.574959  normal  0.736744 
 
 
-
 
NC_009975  MmarC6_0607  2-hydroxyglutaryl-CoA dehydratase D-component  21.88 
 
 		 373 aa  44.7  0.002  Methanococcus maripaludis C6  Archaea  normal  0.422107  n/a   
 
 
-
 
NC_007644  Moth_1418  2-hydroxyglutaryl-CoA dehydratase, D-component  25.31 
 
 		 436 aa  44.3  0.003  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.00133287  normal  0.906732 
 
 
-
 
NC_007519  Dde_0090  2-hydroxyglutaryl-CoA dehydratase, beta subunit-like  21.95 
 
 		 426 aa  43.9  0.004  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  1  n/a   
 
 
-
 
NC_013512  Sdel_2024  2-hydroxyglutaryl-CoA dehydratase D-component  22.87 
 
 		 439 aa  43.9  0.004  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  1  n/a   
 
 
-
 
NC_009135  MmarC5_0834  2-hydroxyglutaryl-CoA dehydratase, D-component  22.29 
 
 		 373 aa  43.1  0.006  Methanococcus maripaludis C5  Archaea  normal  1  n/a   
 
 
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