| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2055 |
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| Symbol | |
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| ID | 3973974 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2248756 |
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| End bp | 2249886 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637925164 |
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| Product | 2-hydroxyglutaryl-CoA dehydratase, D-component |
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| Protein accession | YP_531929 |
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| Protein GI | 90423559 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1775] Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.574959 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.736744 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCGAC CGGATTCCAT CGCTGCCGCG GTGCAGGATG TCCTCGACCT GCACCGCGAT
CGCCTCGCGC TCCTCGCCGG GATCGACCGG CCGAAGATCG GTTACCTGTC GATTCAGACC
CCCGAGGAAA TCCTGCTGGC CGCGGGCGCG ATCCCGTTCC GGCTGACCGG CGAGTACAGC
ACCGAGACCG ATAGGGCGAG CGTGCATCTT GGCAGCAACT ACTGTTCCTA CGTGCTAAGC
TGCTTCGGCG AGGGACTCGC CGGCGTCTAT GGCTTCGCGG ATGCGGTCGT GTTCGTCGAT
GCCTGCGATA TGCGCAAGCG GCTGTGGGAG ACCTGGGCTC GGACCGTTCC CGGTTGTGAA
AGCTGGTTCC TCGAACTTCC CAACGACGCG AGTCCATTGT CGAAATCGTT CTTCGCCGGT
CAGCTTCGCA AGCTGATCCG CCGGCTGGAG CAACGCTACG GCCGGCCGAT CGGCGAGGGC
GCGCTGCGCG ACGGCATCGC GCGGTGCAAC CGCACGCGCG AGCTGATGCA GCGGCTCTAC
GACGGCAACA AGCGCGGCGG CCCGCTGCTG ACGGGCCAGC AGTCGATCGA ACTCGTGAAG
GCGGCAACAA CGGGGCTGAA GGACGAATTC AACGATCGCC TGGCGGCGCT GCTCGACGCC
GCGGCTTCGC AGCAACCCCG GGCCGGTCGG CAGCGGCACC GGGTGTTGAT CTGCGGCAGC
TATTTCGACC AACCGGCGAT CGTGGAGGTC ATCGAGGCCA CCGGCGCCGA CATCGTCTGC
GGGGATATCA GCAACGGGGT CAAGTATTTC GAAGGCAGGA TCGATGCCGA CGCGGAGCCG
GTTGCCGCCA TCGCCGACTA CTATCTCGAA AAGCACACCA GCGCGCGCTG CATCGATACC
GACATCCGGC TGCGGCACCT GTTCGACTTG GTGCGGGACT ATCGCGTGGA ATCGGTGATC
TACTTCGCCC TGAAATTCTG TGACACCAAT CTGCACGACT ACCCCTACAT CAAGGAAAAA
TTGCGCGAGC AGAAGATCCC CGTTCTGTTC ATCGAAGGCG AGCACAACGG CAGCAATATC
GCCAGCATCA AGACGCGCAT CGAGACGTTC CTGGAGCCGC GGTTTTTCTG A
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| Protein sequence | MTRPDSIAAA VQDVLDLHRD RLALLAGIDR PKIGYLSIQT PEEILLAAGA IPFRLTGEYS
TETDRASVHL GSNYCSYVLS CFGEGLAGVY GFADAVVFVD ACDMRKRLWE TWARTVPGCE
SWFLELPNDA SPLSKSFFAG QLRKLIRRLE QRYGRPIGEG ALRDGIARCN RTRELMQRLY
DGNKRGGPLL TGQQSIELVK AATTGLKDEF NDRLAALLDA AASQQPRAGR QRHRVLICGS
YFDQPAIVEV IEATGADIVC GDISNGVKYF EGRIDADAEP VAAIADYYLE KHTSARCIDT
DIRLRHLFDL VRDYRVESVI YFALKFCDTN LHDYPYIKEK LREQKIPVLF IEGEHNGSNI
ASIKTRIETF LEPRFF
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