Gene Dtox_1465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_1465 
Symbol 
ID8428422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp1523033 
End bp1524142 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content44% 
IMG OID645033797 
Product2-hydroxyglutaryl-CoA dehydratase D-component 
Protein accessionYP_003190953 
Protein GI258514731 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1775] Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGATC AGAATATACT GGTTTTAGAG GATGCAGTAA GAAGTAATAG AAAAATTGTA 
GGAATGTACT GTGCCTATTC CCCACAGGAA TTAATTTTGG CTGCCGGGGC TCTGCCGGTC
GGTCTTTGTG GAACCAGGCA CGAGCCCATT GCGGAGGCGG AGAAGGTGTT GCCTCGAAAC
CTATGTCCTT TGATTAAGTC AAGTTTTGGC CTTGCAATAA CCGATAGCTG CATTTATTTT
CGCTTATCGG ATTTCATTAT TGCAGAAACT ACTTGTGATG GTAAGAAAAA AATGTATGAG
TTGTTGCGCC AATATAAACC CATTCATGTT ATGCACCTGC CCCAGGGAAC TGACCGGGGC
TGTGCACTAC GTTGGTGGGT AGATGAATTG TACTTATTAA AAGAAGCCCT GGAGTTTAAC
CTCGGGGTGG TAATAAGCCG GGAAAATTTA CGGGCCGCCA TAAAATTATC AAACAGGGAG
CGCTTGGCAA TGAGGCACCT GCATGCTTTG AATAAGCATA ACCCGGCCGC ATTAACGGGG
TTAGATATGC TTACCAGTAT TCTTAGTATA GATAAAGAAG ATGGAATTGA ACTATTTGAG
CAACTAATTG AAAATATCAG GATGAATGCA GAGAAGGGAA TGTCGCCATT TTCTCCAGGA
ACACCGCGCA TACTCTTGAC AGGTTGCCCG GTGGGACTCG GTTCGGAAAA GGTAGTAAAG
TTGCTGGAGG AATGCGGTGG TAGTGTGGTT TGTTTTGAAA ACTGCAGCGG TTACAAAACG
TTGGATGATC TGGTAGATGA AAGTGAGGAT AGAGACCCTA TGGAAGCTAT AGCCGAGAAA
TACCTAAAAA TTACCTGTTC CTGCCTTTCA CCCAATATGG GGCGTTATGA TTTAATTAAC
AGACTGTCGA AGGAATATGA AGTAGACGGG GTGGTGGATC TTTCCTGGCA TTCCTGCCAT
ACCTATAACG TGGAGGGTGA ATCAATTCGT CGTTACGTCA GGGATGGTCT GGGATTGCCA
TACTTACAGT TGGAGACCGA CTATTCTGTT AATGATTTGC AGCAATTGAA GATAAGAATT
TCCGCCTTTA TTGAGATGCT GAATAGGTAA
 
Protein sequence
MPDQNILVLE DAVRSNRKIV GMYCAYSPQE LILAAGALPV GLCGTRHEPI AEAEKVLPRN 
LCPLIKSSFG LAITDSCIYF RLSDFIIAET TCDGKKKMYE LLRQYKPIHV MHLPQGTDRG
CALRWWVDEL YLLKEALEFN LGVVISRENL RAAIKLSNRE RLAMRHLHAL NKHNPAALTG
LDMLTSILSI DKEDGIELFE QLIENIRMNA EKGMSPFSPG TPRILLTGCP VGLGSEKVVK
LLEECGGSVV CFENCSGYKT LDDLVDESED RDPMEAIAEK YLKITCSCLS PNMGRYDLIN
RLSKEYEVDG VVDLSWHSCH TYNVEGESIR RYVRDGLGLP YLQLETDYSV NDLQQLKIRI
SAFIEMLNR