Gene Dtox_2825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_2825 
Symbol 
ID8429814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp2983121 
End bp2984227 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content38% 
IMG OID645035089 
Product2-hydroxyglutaryl-CoA dehydratase D-component 
Protein accessionYP_003192213 
Protein GI258515991 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1775] Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAAGTC TTAGTTATCT AAATGAAGTA GAAAAGCAAG TGATACTATC AACCAAAGAA 
CAAAAGGCGA AGGGTACTAA GGTGGTAGGT GTATACTGCG CCTTTACCCC AAGAGAGCTA
ATTGCTGCAG CAGGTGGCAT ACCGGTATCT TTATGTGGAT CTTCCAATAA ACCTATACCT
GCGGCAGAAC AGCACTTACC TAAAAACTTA TGTCCCTTAA TCAAATCGAG CTACGGTTTT
GCGATAACCA ACACCTGTCC CTATTTTGAT CTTGCAGATA TTCTTATAGC AGATGCTACT
TGTGACGGTA AGAAAAAAAT GTTTGAACTA TTGAGCAGGA TTAAACCGGT ACATTTGCTT
CAGTTACCGC AAACATCCGC CAGTAAAAGC GCTTTCGAAT ACTGGTTAAG CGAATTATAC
CTTCTTAAGG ATCTATTAGA AGAAAAATTA GAATGTAAAA TTACTAATGA AAAACTATTT
GAGACAATCA GGCTATACAA TAAGGCCAGA CAGCTAAAAA ACAGTCTTTT TCAATTGAAT
AAAAAGGGGC AAACCCTTTT GACCGGTCGA GAAATTAATA TTGCTATCGA TAGCTGGGGT
TTAGAAATTG ACTTATCTTC TCACATAACA AGACTATTAC GGGTAATTGA ATATGCTCTA
ATAAGAGGCG GTACAGAGCC TAAACCCCGC ATTTTACTAA CCGGATGCCC AACCACTTGT
AAAAAGGTAT TAAATATTAT TGAAGAAGCA GCCACGGTTG TAGTTATGGA AAACTGTGGC
GGTATGAAAA CGCTGGTCGA TTCAGTAGAT GAATCAGGTG ATCCTATGAC TGCTTTAGCT
AAGTATTATC TTAATATTGC CTGTCCCTGC ATGACACCTA ATCAGCGCCG GTATGATATC
TTGTCAAAGT TAATTGAGGA ATACATGGTT GACGGGGTTA TTGACCTAAC CTGGCAGGCC
TGCCATACCT ACAATATTGA ATCTTATCCA CTTGGCAGGT TTATTCAAAA TCTAGGTATT
CCTTATCTTC AACTGGAGAC TGATTATTCT GAATCGGATG AAAACTGGAT TAGAGTAAGA
GTTGAGGCTT TTGTTGAAAT GTTTTAG
 
Protein sequence
MLSLSYLNEV EKQVILSTKE QKAKGTKVVG VYCAFTPREL IAAAGGIPVS LCGSSNKPIP 
AAEQHLPKNL CPLIKSSYGF AITNTCPYFD LADILIADAT CDGKKKMFEL LSRIKPVHLL
QLPQTSASKS AFEYWLSELY LLKDLLEEKL ECKITNEKLF ETIRLYNKAR QLKNSLFQLN
KKGQTLLTGR EINIAIDSWG LEIDLSSHIT RLLRVIEYAL IRGGTEPKPR ILLTGCPTTC
KKVLNIIEEA ATVVVMENCG GMKTLVDSVD ESGDPMTALA KYYLNIACPC MTPNQRRYDI
LSKLIEEYMV DGVIDLTWQA CHTYNIESYP LGRFIQNLGI PYLQLETDYS ESDENWIRVR
VEAFVEMF