More than 300 homologs were found in PanDaTox collection
for query gene Dgeo_0175 on replicon NC_008025
Organism: Deinococcus geothermalis DSM 11300



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008025  Dgeo_0175  histone-like protein DNA-binding protein  100 
 
 		 116 aa  224  3e-58  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  0.434462 
 
 
-
 
NC_008010  Dgeo_2501  histone-like DNA-binding protein  68.13 
 
 		 149 aa  131  3.9999999999999996e-30  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  n/a   
 
 
-
 
NC_009524  PsycPRwf_1626  histone family protein DNA-binding protein  39.33 
 
 		 90 aa  75.1  0.0000000000003  Psychrobacter sp. PRwf-1  Bacteria  unclonable  0.00000000000133039  hitchhiker  0.00000000638901 
 
 
-
 
NC_010184  BcerKBAB4_2184  histone family protein DNA-binding protein  48.81 
 
 		 90 aa  75.1  0.0000000000003  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.170143  n/a   
 
 
-
 
NC_011772  BCG9842_B2983  DNA-binding protein HU  47.62 
 
 		 90 aa  74.7  0.0000000000004  Bacillus cereus G9842  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011725  BCB4264_A2342  DNA-binding protein HU  47.62 
 
 		 90 aa  74.7  0.0000000000004  Bacillus cereus B4264  Bacteria  normal  0.868034  n/a   
 
 
-
 
NC_007204  Psyc_1474  putative DNA-binding protein HU-beta  38.37 
 
 		 90 aa  73.9  0.0000000000006  Psychrobacter arcticus 273-4  Bacteria  hitchhiker  0.0000000000000997119  hitchhiker  0.0000985943 
 
 
-
 
NC_011773  BCAH820_2395  DNA-binding protein HU  47.62 
 
 		 90 aa  73.6  0.0000000000009  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_003909  BCE_2407  DNA-binding protein HU  47.62 
 
 		 90 aa  73.6  0.0000000000009  Bacillus cereus ATCC 10987  Bacteria  normal  0.020348  n/a   
 
 
-
 
NC_005945  BAS2213  DNA-binding protein HU  47.62 
 
 		 90 aa  73.6  0.0000000000009  Bacillus anthracis str. Sterne  Bacteria  normal  0.519209  n/a   
 
 
-
 
NC_005957  BT9727_2152  DNA-binding protein HU  47.62 
 
 		 90 aa  73.6  0.0000000000009  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0274093  n/a   
 
 
-
 
NC_006274  BCZK2136  DNA-binding protein HU  47.62 
 
 		 90 aa  73.6  0.0000000000009  Bacillus cereus E33L  Bacteria  normal  1  n/a   
 
 
-
 
NC_007530  GBAA_2377  DNA-binding protein HU  47.62 
 
 		 90 aa  73.6  0.0000000000009  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_009674  Bcer98_1763  histone family protein DNA-binding protein  47.62 
 
 		 90 aa  73.6  0.0000000000009  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.203917  n/a   
 
 
-
 
NC_007969  Pcryo_1653  histone-like DNA-binding protein  38.37 
 
 		 90 aa  73.6  0.0000000000009  Psychrobacter cryohalolentis K5  Bacteria  unclonable  0.00000047794  unclonable  0.0000440637 
 
 
 
NC_011658  BCAH187_A2477  DNA-binding protein HU  47.62 
 
 		 90 aa  73.6  0.0000000000009  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_013411  GYMC61_0465  histone family protein DNA-binding protein  43.02 
 
 		 90 aa  72.4  0.000000000002  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011775  BCG9842_0074  DNA-binding protein HU  46.43 
 
 		 90 aa  70.1  0.000000000009  Bacillus cereus G9842  Bacteria  unclonable  0.00000000000481156  n/a   
 
 
-
 
NC_003909  BCE_1637  DNA-binding protein HU  44.05 
 
 		 90 aa  69.7  0.00000000001  Bacillus cereus ATCC 10987  Bacteria  decreased coverage  0.00420342  n/a   
 
 
-
 
NC_005945  BAS1420  DNA-binding protein HU  44.05 
 
 		 90 aa  69.7  0.00000000001  Bacillus anthracis str. Sterne  Bacteria  normal  0.190218  n/a   
 
 
-
 
NC_005957  BT9727_1392  DNA-binding protein HU  44.05 
 
 		 90 aa  69.7  0.00000000001  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.011833  n/a   
 
 
-
 
NC_006274  BCZK1392  DNA-binding protein HU  44.05 
 
 		 90 aa  69.7  0.00000000001  Bacillus cereus E33L  Bacteria  decreased coverage  0.00000512711  n/a   
 
 
-
 
NC_011773  BCAH820_1604  DNA-binding protein HU  44.05 
 
 		 90 aa  69.7  0.00000000001  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.000159132 
 
 
-
 
NC_009674  Bcer98_1233  histone family protein DNA-binding protein  44.05 
 
 		 90 aa  69.7  0.00000000001  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.0133564  n/a   
 
 
-
 
NC_013739  Cwoe_1870  histone family protein DNA-binding protein  41.86 
 
 		 91 aa  70.1  0.00000000001  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  0.0130937 
 
 
-
 
NC_007530  GBAA_1531  DNA-binding protein HU  44.05 
 
 		 90 aa  69.7  0.00000000001  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.259543  n/a   
 
 
-
 
NC_011658  BCAH187_A1673  DNA-binding protein HU  44.05 
 
 		 90 aa  69.7  0.00000000001  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000325838  n/a   
 
 
-
 
NC_011725  BCB4264_A1566  DNA-binding protein HU  44.05 
 
 		 90 aa  69.7  0.00000000001  Bacillus cereus B4264  Bacteria  normal  0.236067  n/a   
 
 
-
 
NC_008576  Mmc1_1251  histone family protein DNA-binding protein  42.5 
 
 		 91 aa  69.7  0.00000000001  Magnetococcus sp. MC-1  Bacteria  normal  0.0902596  normal  0.20081 
 
 
-
 
NC_010184  BcerKBAB4_1434  histone family protein DNA-binding protein  44.05 
 
 		 90 aa  69.7  0.00000000001  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.087278  n/a   
 
 
-
 
NC_008576  Mmc1_2903  histone family protein DNA-binding protein  42.5 
 
 		 91 aa  69.7  0.00000000001  Magnetococcus sp. MC-1  Bacteria  decreased coverage  0.00933352  normal  0.626047 
 
 
-
 
NC_011772  BCG9842_B3779  DNA-binding protein HU  44.05 
 
 		 90 aa  69.7  0.00000000001  Bacillus cereus G9842  Bacteria  decreased coverage  0.000354145  normal  0.961445 
 
 
-
 
NC_009719  Plav_3229  histone family protein DNA-binding protein  39.53 
 
 		 91 aa  68.9  0.00000000002  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007498  Pcar_1686  DNA-binding protein HU-beta, NS1(HU-1)  40.7 
 
 		 90 aa  68.9  0.00000000002  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  6.460310000000001e-19  n/a   
 
 
-
 
NC_008228  Patl_3133  histone-like DNA-binding protein  45.24 
 
 		 90 aa  69.3  0.00000000002  Pseudoalteromonas atlantica T6c  Bacteria  unclonable  0.0000000045924  n/a   
 
 
-
 
NC_012793  GWCH70_2154  histone family protein DNA-binding protein  41.86 
 
 		 90 aa  69.3  0.00000000002  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.000000552537  n/a   
 
 
-
 
NC_013946  Mrub_0180  histone family protein DNA-binding protein  43.21 
 
 		 100 aa  68.6  0.00000000003  Meiothermus ruber DSM 1279  Bacteria  unclonable  0.000000000456063  normal  0.670354 
 
 
-
 
NC_013456  VEA_002182  DNA-binding protein HU-alpha  45.24 
 
 		 90 aa  67.8  0.00000000004  Vibrio sp. Ex25  Bacteria  normal  0.131368  n/a   
 
 
-
 
NC_008528  OEOE_1010  nucleoid protein Hbs  42.86 
 
 		 91 aa  67.8  0.00000000005  Oenococcus oeni PSU-1  Bacteria  normal  0.301873  n/a   
 
 
-
 
NC_008709  Ping_1468  DNA-binding protein HU beta subunit  44.05 
 
 		 91 aa  67.8  0.00000000005  Psychromonas ingrahamii 37  Bacteria  normal  0.961834  normal  0.643607 
 
 
-
 
NC_012917  PC1_1051  transcriptional regulator HU subunit beta  41.67 
 
 		 90 aa  67  0.00000000007  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.593082  n/a   
 
 
-
 
NC_013421  Pecwa_3261  transcriptional regulator HU subunit beta  41.67 
 
 		 90 aa  67  0.00000000007  Pectobacterium wasabiae WPP163  Bacteria  normal  1  n/a   
 
 
-
 
NC_011312  VSAL_I0822  DNA-binding protein HU-beta  41.86 
 
 		 98 aa  66.6  0.0000000001  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.172487  n/a   
 
 
-
 
NC_002950  PG0121  DNA-binding protein HU  38.55 
 
 		 88 aa  66.6  0.0000000001  Porphyromonas gingivalis W83  Bacteria  n/a    hitchhiker  0.00022412 
 
 
-
 
NC_009092  Shew_0430  histone family protein DNA-binding protein  37.93 
 
 		 90 aa  66.2  0.0000000001  Shewanella loihica PV-4  Bacteria  normal  0.719598  normal  1 
 
 
-
 
NC_009901  Spea_3731  histone family protein DNA-binding protein  35.96 
 
 		 90 aa  66.2  0.0000000001  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_013525  Tter_0705  histone family protein DNA-binding protein  37.04 
 
 		 84 aa  66.6  0.0000000001  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013093  Amir_0860  histone family protein DNA-binding protein  42.86 
 
 		 90 aa  65.5  0.0000000002  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0124999  n/a   
 
 
-
 
NC_011312  VSAL_I2846  DNA-binding protein HU-alpha  44.05 
 
 		 90 aa  65.9  0.0000000002  Aliivibrio salmonicida LFI1238  Bacteria  decreased coverage  0.00368421  n/a   
 
 
-
 
NC_009783  VIBHAR_00213  DNA-binding protein  44.05 
 
 		 101 aa  65.9  0.0000000002  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009523  RoseRS_4008  histone family protein DNA-binding protein  41.38 
 
 		 92 aa  65.9  0.0000000002  Roseiflexus sp. RS-1  Bacteria  hitchhiker  0.0000735771  normal  1 
 
 
-
 
NC_008576  Mmc1_1118  HU family DNA-binding protein  44.19 
 
 		 91 aa  66.2  0.0000000002  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.00000128568  normal  1 
 
 
-
 
NC_014212  Mesil_0431  histone family protein DNA-binding protein  40.48 
 
 		 96 aa  65.1  0.0000000003  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00947903  hitchhiker  0.00103246 
 
 
-
 
NC_009783  VIBHAR_01420  nucleoid DNA-binding protein  42.86 
 
 		 90 aa  65.5  0.0000000003  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009719  Plav_0506  histone family protein DNA-binding protein  40.96 
 
 		 113 aa  64.7  0.0000000004  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  0.424528 
 
 
-
 
NC_008740  Maqu_1837  histone family protein DNA-binding protein  42.86 
 
 		 90 aa  64.3  0.0000000005  Marinobacter aquaeolei VT8  Bacteria  hitchhiker  0.00431989  n/a   
 
 
-
 
NC_010524  Lcho_3566  histone family protein DNA-binding protein  36.9 
 
 		 131 aa  64.3  0.0000000005  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.276347 
 
 
-
 
NC_008576  Mmc1_0914  HU family DNA-binding protein  44.16 
 
 		 91 aa  64.3  0.0000000005  Magnetococcus sp. MC-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012791  Vapar_4266  histone family protein DNA-binding protein  42.86 
 
 		 93 aa  64.3  0.0000000006  Variovorax paradoxus S110  Bacteria  normal  0.598481  n/a   
 
 
-
 
NC_011898  Ccel_3085  histone family protein DNA-binding protein  36.05 
 
 		 91 aa  64.3  0.0000000006  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.000115471  n/a   
 
 
-
 
NC_009831  Ssed_0600  histone family protein DNA-binding protein  34.83 
 
 		 90 aa  63.9  0.0000000006  Shewanella sediminis HAW-EB3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011831  Cagg_2800  histone family protein DNA-binding protein  40.7 
 
 		 91 aa  64.3  0.0000000006  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.0357703  normal  0.314241 
 
 
-
 
NC_012034  Athe_0648  histone family protein DNA-binding protein  38.37 
 
 		 91 aa  64.3  0.0000000006  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.0000000000417185  n/a   
 
 
-
 
NC_010320  Teth514_0687  histone family protein DNA-binding protein  39.53 
 
 		 91 aa  63.9  0.0000000006  Thermoanaerobacter sp. X514  Bacteria  normal  0.105584  n/a   
 
 
-
 
NC_009718  Fnod_0010  histone family protein DNA-binding protein  37.08 
 
 		 91 aa  64.3  0.0000000006  Fervidobacterium nodosum Rt17-B1  Bacteria  decreased coverage  0.000000000649518  n/a   
 
 
-
 
NC_013456  VEA_004041  DNA-binding protein HU-beta  42.86 
 
 		 90 aa  63.9  0.0000000007  Vibrio sp. Ex25  Bacteria  unclonable  0.000000015142  n/a   
 
 
-
 
NC_009972  Haur_4202  histone family protein DNA-binding protein  39.53 
 
 		 95 aa  63.9  0.0000000007  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.806562  n/a   
 
 
-
 
NC_002976  SERP1041  DNA-binding protein HU  39.29 
 
 		 90 aa  63.9  0.0000000008  Staphylococcus epidermidis RP62A  Bacteria  normal  0.436255  n/a   
 
 
-
 
NC_011901  Tgr7_0942  histone family protein DNA-binding protein  42.86 
 
 		 90 aa  63.5  0.0000000008  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  1  n/a   
 
 
-
 
NC_013385  Adeg_2069  histone family protein DNA-binding protein  41.67 
 
 		 95 aa  63.5  0.0000000008  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_009632  SaurJH1_1560  histone family protein DNA-binding protein  39.29 
 
 		 90 aa  63.9  0.0000000008  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.768925  n/a   
 
 
-
 
NC_009487  SaurJH9_1530  histone family protein DNA-binding protein  39.29 
 
 		 90 aa  63.9  0.0000000008  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.277737  n/a   
 
 
-
 
NC_009972  Haur_3398  histone family protein DNA-binding protein  39.53 
 
 		 92 aa  63.5  0.0000000008  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.000223697  n/a   
 
 
-
 
NC_010465  YPK_3231  transcriptional regulator HU subunit beta  39.29 
 
 		 90 aa  63.2  0.000000001  Yersinia pseudotuberculosis YPIII  Bacteria  normal  1  n/a   
 
 
-
 
NC_011146  Gbem_1275  histone family protein DNA-binding protein  41.67 
 
 		 91 aa  62.8  0.000000001  Geobacter bemidjiensis Bem  Bacteria  decreased coverage  0.0000000292942  n/a   
 
 
-
 
NC_012912  Dd1591_3065  transcriptional regulator HU subunit beta  39.29 
 
 		 90 aa  62.8  0.000000001  Dickeya zeae Ech1591  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_3008  histone family protein DNA-binding protein  41.67 
 
 		 91 aa  63.2  0.000000001  Geobacter sp. M21  Bacteria  n/a    normal  0.341575 
 
 
-
 
NC_009140  SNSL254_pSN254_0022  DNA-binding protein HU  39.29 
 
 		 90 aa  63.2  0.000000001  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  hitchhiker  0.00102315  hitchhiker  0.000567997 
 
 
-
 
NC_010159  YpAngola_A3051  transcriptional regulator HU subunit beta  39.29 
 
 		 90 aa  63.2  0.000000001  Yersinia pestis Angola  Bacteria  hitchhiker  0.00488463  normal  1 
 
 
-
 
NC_010506  Swoo_4353  histone family protein DNA-binding protein  33.71 
 
 		 90 aa  63.2  0.000000001  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008340  Mlg_2285  histone family protein DNA-binding protein  40.48 
 
 		 90 aa  63.2  0.000000001  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0556838  normal  1 
 
 
-
 
NC_009708  YpsIP31758_3089  transcriptional regulator HU subunit beta  39.29 
 
 		 90 aa  63.2  0.000000001  Yersinia pseudotuberculosis IP 31758  Bacteria  unclonable  1.42002e-19  n/a   
 
 
-
 
NC_009654  Mmwyl1_1726  histone family protein DNA-binding protein  45.24 
 
 		 90 aa  63.2  0.000000001  Marinomonas sp. MWYL1  Bacteria  unclonable  0.00000000326644  hitchhiker  0.00672024 
 
 
-
 
NC_009767  Rcas_0673  histone family protein DNA-binding protein  39.08 
 
 		 92 aa  63.2  0.000000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.25409 
 
 
-
 
NC_009012  Cthe_2657  nucleoid protein Hbs  38.37 
 
 		 91 aa  62.8  0.000000002  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.000194133  n/a   
 
 
-
 
NC_007484  Noc_1772  histone-like DNA-binding protein  38.1 
 
 		 90 aa  62  0.000000002  Nitrosococcus oceani ATCC 19707  Bacteria  decreased coverage  0.000757515  n/a   
 
 
-
 
NC_010180  BcerKBAB4_5693  histone family protein DNA-binding protein  41.86 
 
 		 90 aa  62.4  0.000000002  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0471576  normal  0.0346696 
 
 
-
 
NC_009727  CBUD_0508  DNA-binding protein HU  34.88 
 
 		 94 aa  62.4  0.000000002  Coxiella burnetii Dugway 5J108-111  Bacteria  hitchhiker  0.000000377509  n/a   
 
 
-
 
NC_007644  Moth_0085  nucleoid protein Hbs  40.48 
 
 		 91 aa  62.4  0.000000002  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0539634  normal  1 
 
 
-
 
NC_007963  Csal_3249  histone-like DNA-binding protein  41.67 
 
 		 90 aa  62.8  0.000000002  Chromohalobacter salexigens DSM 3043  Bacteria  normal  1  n/a   
 
 
-
 
NC_013440  Hoch_3742  integration host factor, alpha subunit  37.36 
 
 		 100 aa  62.4  0.000000002  Haliangium ochraceum DSM 14365  Bacteria  normal  0.266099  normal  0.554438 
 
 
-
 
NC_008599  CFF8240_0846  DNA-binding protein HU  37.21 
 
 		 104 aa  62.8  0.000000002  Campylobacter fetus subsp. fetus 82-40  Bacteria  hitchhiker  0.0000034735  n/a   
 
 
-
 
NC_010117  COXBURSA331_A1641  DNA-binding protein HU  34.88 
 
 		 94 aa  62.4  0.000000002  Coxiella burnetii RSA 331  Bacteria  unclonable  7.02248e-19  n/a   
 
 
-
 
NC_003909  BCE_3756  DNA-binding protein HU  40.48 
 
 		 90 aa  62  0.000000003  Bacillus cereus ATCC 10987  Bacteria  unclonable  0.0000000000231467  n/a   
 
 
-
 
NC_005957  BT9727_3473  DNA-binding protein HU  40.48 
 
 		 90 aa  62  0.000000003  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  1.59147e-20  n/a   
 
 
-
 
NC_006274  BCZK3486  DNA-binding protein HU  40.48 
 
 		 90 aa  62  0.000000003  Bacillus cereus E33L  Bacteria  unclonable  0.000000000000148823  n/a   
 
 
-
 
NC_009800  EcHS_A0517  transcriptional regulator HU subunit beta  39.29 
 
 		 90 aa  61.6  0.000000003  Escherichia coli HS  Bacteria  hitchhiker  0.0000000000441181  n/a   
 
 
-
 
NC_011658  BCAH187_A3778  DNA-binding protein HU  40.48 
 
 		 90 aa  62  0.000000003  Bacillus cereus AH187  Bacteria  unclonable  0.000000000704337  n/a   
 
 
-
 
NC_010468  EcolC_3192  transcriptional regulator HU subunit beta  39.29 
 
 		 90 aa  61.6  0.000000003  Escherichia coli ATCC 8739  Bacteria  normal  0.0216859  hitchhiker  0.00242013 
 
 
-
 
NC_010498  EcSMS35_0483  transcriptional regulator HU subunit beta  39.29 
 
 		 90 aa  61.6  0.000000003  Escherichia coli SMS-3-5  Bacteria  hitchhiker  0.000219434  normal  1 
 
 
-
 
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