Gene Plav_0506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0506 
Symbol 
ID5454963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp547216 
End bp547557 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content61% 
IMG OID640876072 
Producthistone family protein DNA-binding protein 
Protein accessionYP_001411786 
Protein GI154250962 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value0.424528 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACTA AACCCGCTGC CAAAAAGGCG CCTGCCGCCG CTGCTGCCAA GAAGGCACCG 
ACAGCGCCGA CGGTTCCGAT GTCGAAGCTG ATTGCCGAAA TCGCCGAGAA GCACGATCTC
TCGAAGAAGG CGGCAACCGA GCTCTTCAGC GACTTCGTCG AATTGACGGT GAAGAACCTG
AAAAAGGGCA ACAAGGTCCG TCTCACCGGT CTCGGCATCC TGCAGGTGCG CAAGCGCGCC
GCCCGCATGG GCCGCAATCC GGCGACGGGC GAAGCCATCA AGATCAAAGC CTCCAAGAAG
GTCGCCTTCC GCGTCGCGAA GGACCTGAAG GAAGCCATCT AA
 
Protein sequence
MATKPAAKKA PAAAAAKKAP TAPTVPMSKL IAEIAEKHDL SKKAATELFS DFVELTVKNL 
KKGNKVRLTG LGILQVRKRA ARMGRNPATG EAIKIKASKK VAFRVAKDLK EAI