| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3566 |
|---|
| Symbol | |
|---|
| ID | 6160996 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | + |
|---|
| Start bp | 3983828 |
|---|
| End bp | 3984223 |
|---|
| Gene Length | 396 bp |
|---|
| Protein Length | 131 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641666339 |
|---|
| Product | histone family protein DNA-binding protein |
|---|
| Protein accession | YP_001792585 |
|---|
| Protein GI | 171060236 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.276347 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAAG CCGAACTGAT CGAAGTCCTG GCCAAGCAGC ACACCCTGTC CAAAGCCGAA
GCCGCCCGCA TCCTGGCGAC CGTGCTCGAC ACCGTCGTGG CCACCGTCAA GAAGGGCGGC
GCCGTCACCC TGCCGGGCTT CGGCTCGTTC AAGCAGCACG CCCGCGCAGC GCGCAACGGC
GTCAACCCCG GCACCGGCGA CAAGATCAAG ATCGCCGCCG TGAAGCTGCC CAAGTTCACG
CCCGGCACCG CCTTCAAGGC CGCCGTCGAC CCGAAGGCTG CCGCTCGCAA GGCCGCCAAG
GCCGCAGGCG CCGCACCGGT CAAGGTCGCA GCCAAGAAGG CCGCCAAGAC CGCCGCCAAG
CCGGCCGCAC GCAAGTCGGG CAAGACCGGC GGCTGA
|
|---|
| Protein sequence | MNKAELIEVL AKQHTLSKAE AARILATVLD TVVATVKKGG AVTLPGFGSF KQHARAARNG
VNPGTGDKIK IAAVKLPKFT PGTAFKAAVD PKAAARKAAK AAGAAPVKVA AKKAAKTAAK
PAARKSGKTG G
|
|---|
| |