| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2846 |
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| Symbol | hupA |
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| ID | 6987943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 3085279 |
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| End bp | 3085551 |
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| Gene Length | 273 bp |
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| Protein Length | 90 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643381123 |
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| Product | DNA-binding protein HU-alpha |
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| Protein accession | YP_002264180 |
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| Protein GI | 209696250 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00368421 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATAAAA CCCAGTTAAT TGATGCTATT GCTGAAAAAG CAGACCTATC AAAAGCACAA
GCAAAAGCAG CTCTTGAAGC GACTCTAGAA GGCGTAACTG GCGCATTGAA AGATGGCGAT
CAGGTTCAAC TTATTGGCTT TGGTACATTT AAAGTTAATC ACCGCGCAGC TCGTACTGGT
CGCAACCCTA AGACTGGTGA AGAGATTCAA ATTAAAGCGG CTAATGTTCC AGCATTTGTT
GCCGGTAAAG CACTGAAAGA ATCAGTAAAC TAA
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| Protein sequence | MNKTQLIDAI AEKADLSKAQ AKAALEATLE GVTGALKDGD QVQLIGFGTF KVNHRAARTG
RNPKTGEEIQ IKAANVPAFV AGKALKESVN
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