25 homologs were found in PanDaTox collection
for query gene Arth_3084 on replicon NC_008541
Organism: Arthrobacter sp. FB24



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008541  Arth_3084  TetR family transcriptional regulator  100 
 
 
201 aa  414  9.999999999999999e-116  Arthrobacter sp. FB24  Bacteria  normal  0.634756  n/a   
 
 
-
 
NC_011886  Achl_2784  putative transcriptional regulator, TetR family  76.88 
 
 
199 aa  330  1e-89  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00495892 
 
 
-
 
NC_013595  Sros_4737  putative transcriptional regulator, TetR family  27.37 
 
 
192 aa  68.9  0.00000000005  Streptosporangium roseum DSM 43021  Bacteria  normal  0.959543  normal  0.434149 
 
 
-
 
NC_010581  Bind_2514  TetR family transcriptional regulator  34.48 
 
 
191 aa  63.5  0.000000002  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.348132 
 
 
-
 
NC_014210  Ndas_1727  transcriptional regulator, TetR family  24.6 
 
 
197 aa  62  0.000000005  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0492221  normal  0.584646 
 
 
-
 
NC_009921  Franean1_6683  TetR family transcriptional regulator  29.26 
 
 
207 aa  62.4  0.000000005  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_3500  transcriptional regulator, TetR family  34.82 
 
 
186 aa  61.2  0.00000001  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.711575  n/a   
 
 
-
 
NC_008699  Noca_0973  regulatory protein, TetR  32.08 
 
 
208 aa  60.1  0.00000002  Nocardioides sp. JS614  Bacteria  normal  0.995108  n/a   
 
 
-
 
NC_014212  Mesil_2069  transcriptional regulator, TetR family  25.53 
 
 
191 aa  55.8  0.0000004  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_011365  Gdia_1470  putative transcriptional regulator, TetR family  33.7 
 
 
192 aa  51.2  0.000009  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.596057  normal  0.840694 
 
 
-
 
NC_009664  Krad_3831  transcriptional regulator, TetR family  26.46 
 
 
208 aa  50.4  0.00002  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.484216  normal  0.0261757 
 
 
-
 
NC_009664  Krad_1300  transcriptional regulator, TetR family  24.86 
 
 
188 aa  46.6  0.0002  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.480052 
 
 
-
 
NC_009921  Franean1_4387  TetR family transcriptional regulator  26.26 
 
 
192 aa  45.8  0.0004  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_1828  regulatory protein TetR  36.07 
 
 
207 aa  43.5  0.002  Gordonia bronchialis DSM 43247  Bacteria  normal  0.790266  n/a   
 
 
-
 
NC_013441  Gbro_3991  regulatory protein TetR  29.29 
 
 
197 aa  43.5  0.002  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_2431  transcriptional regulator, TetR family  27.22 
 
 
198 aa  43.5  0.002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.324366  normal 
 
 
-
 
NC_009338  Mflv_4147  TetR family transcriptional regulator  24.74 
 
 
234 aa  43.1  0.003  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_4621  TetR family transcriptional regulator  29.35 
 
 
210 aa  42.7  0.003  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_011772  BCG9842_B4211  transcriptional regulator, TetR family  33.33 
 
 
178 aa  42.7  0.004  Bacillus cereus G9842  Bacteria  normal  normal  0.954356 
 
 
-
 
NC_013131  Caci_8864  transcriptional regulator, TetR family  29.33 
 
 
202 aa  42.4  0.005  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_8111  putative transcriptional regulator, TetR family  31.88 
 
 
168 aa  42.4  0.005  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_2028  transcriptional regulator, TetR family  28 
 
 
194 aa  42  0.006  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.937171  n/a   
 
 
-
 
NC_013441  Gbro_2976  regulatory protein TetR  33.33 
 
 
199 aa  41.6  0.008  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_1483  TetR family transcriptional regulator  37.7 
 
 
197 aa  41.6  0.008  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_3833  transcriptional regulator, TetR family  27.78 
 
 
204 aa  41.2  0.009  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
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