Gene Snas_2431 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2431 
Symbol 
ID8883626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2579275 
End bp2579871 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content64% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003511207 
Protein GI291299929 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.324366 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGACA ACATCGAGAC GACCGGCGAC GACTGGTCGG CGCGCAAACG CGAGCTCCTG 
GAGAAGGCCG TCGAGTACGC CTCCGAGCAC GGCATCACCG AGACCTCACT GCGTCCGCTG
GCCGCCGCGA TCGGCAGCAG CCCCCGGGTG TTGCTGTACC TGTTCGGGTC CAAACAGGAA
CTGTTCGTCG AGATCTTCAC CATCTGCCGG GAACGGCAGT TCAACCTGCT GCTGGGAGCC
CTGGAGGCCA CCGACGACAC CGCCGAGGCG CTGTGGCACC TGTGGAAGTC GTGGCTGGCC
GATCCCAAGC GGCGGGCGCT GATGCGATTG TTCTTCGACA ACTACGTCCA CTCGATGTAC
GGCCACGAAC CGTATCGGGA ATTCGGGCCG AAGAGTGTGG ACCAGTGGCT GGAGGCGCTG
GAGCCGATGG CTCCCGACGG CCCGCCCGCC CGCCGTTCGG CGACGTTGAC GCTGGCGGTG
CTGCGGGGTC TGCTGCTGGA CATCCTGGCT ACCGGCGACA CCGAACGCGT CGACGACGCG
TTGCGATCTT TCTTGTGGCC AAACGGAAGT GAACGTAAAG ACAGCACAAT AGACTGA
 
Protein sequence
MEDNIETTGD DWSARKRELL EKAVEYASEH GITETSLRPL AAAIGSSPRV LLYLFGSKQE 
LFVEIFTICR ERQFNLLLGA LEATDDTAEA LWHLWKSWLA DPKRRALMRL FFDNYVHSMY
GHEPYREFGP KSVDQWLEAL EPMAPDGPPA RRSATLTLAV LRGLLLDILA TGDTERVDDA
LRSFLWPNGS ERKDSTID