Gene Dbac_2028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_2028 
Symbol 
ID8377703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand+ 
Start bp2330172 
End bp2330756 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content54% 
IMG OID645001253 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003158530 
Protein GI256829802 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.937171 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCACGG GACCGACCAA AAAAGAACTG CTGCTCAAGG CTGCCAAAGA ACTGTTCAGC 
GAACACGGTT ATTCGGAAAC GACGTTCAAG AAAATCTCAG AACGGGCCGG CGTGGCTCTC 
GGGCTTCTGA CCCACCACTT CGGCAACAAG GAAAAGCTCT TCCTCACAGC CGGCCTCGAT 
GTCGTGCACG AACTCGTGCA GACCATGCGG ACCAACCTGC AAGGCGTTCC CAATGGCCTT 
GAAGCAGTCC GGCTCTTCGC CAAGACCTAT TTTGATTTTG CCCGCAATCC ACGCCAGGAT 
TTCATGGTTC TGGTGCGCTG CTCACCTTTC AGCGATCTGA AGACCGTCGA AGACAAGGAT 
GTGATGATCC GCAACTTCTC GGAACTTTAC GACATCCTGG AAGAATGCGT GGAGCGCGGG 
GTGCATGACG GCAGCATCCG CAGTCTCGAC CCTCACAAAA CCTCGGTTGT CGTTTTCTGC 
AACCTTGTCG GCGGCATCAG GCACGGTCTG CTGACTCCCT ACGGAGATGA AGGCCTGTTC 
GACGATATCG TTGAATTTGT CATTTACGGA CTCAAAGCAA GATAA
 
Protein sequence
MATGPTKKEL LLKAAKELFS EHGYSETTFK KISERAGVAL GLLTHHFGNK EKLFLTAGLD 
VVHELVQTMR TNLQGVPNGL EAVRLFAKTY FDFARNPRQD FMVLVRCSPF SDLKTVEDKD 
VMIRNFSELY DILEECVERG VHDGSIRSLD PHKTSVVVFC NLVGGIRHGL LTPYGDEGLF 
DDIVEFVIYG LKAR