Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8864 |
Symbol | |
ID | 8340257 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 10276792 |
End bp | 10277400 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644961954 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003119518 |
Protein GI | 256397954 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGGCC ACCACACGCC GAGCCGTCGC GCCGCTCAGA GCAAGGGCGA CCTGCGGGAG CGGGCCATCC TCGACACCTG CGAAGCCCTG CTGACGGACA AGGGCTACGA CGCCGTGACC GTCGGCGACA TCGCGCAGGG CGCCGGCATC ACCCGCGGAG CGCTGTACTT CTACTTCGGC TCCAAGCAGG AAGTGGTCAC CGCGCTCGTG GCACGAACCG TCGAGCACCT CTGGGAGAGG TCCCGTTCCA CGGCCCGGGC CGACGTGCCG CGCCAAGCCA TCGCCACGGC GATGCGGCGC ACGGTCGAGC TGTGGAACGA GCACGGTCCG GTCATGCGCA CGGCGATCGA CCTGTCCCTG ACCGTCCCGG AGATCGGCAA CCTGTGGAAC CAGACCGCCG ACCTGTTCAT CGAGGCGATC GCCGCCGTAT TGGAGCACGC CGGAGTCGAG CCCGGCGACG AGCCGAAACA GGCTTCTGCG ATGGCTCGCG CGCTGTGCTG GATGATCGAG CGGAACTTCT ACCACGCCTC GCAGGAGTCC CGCGAAAGCC TGCAGAACAC CTCCGATACG TGCGAACACA TCTGGCTGAT CAGCAGCGGT CTGTCCTGA
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Protein sequence | MSGHHTPSRR AAQSKGDLRE RAILDTCEAL LTDKGYDAVT VGDIAQGAGI TRGALYFYFG SKQEVVTALV ARTVEHLWER SRSTARADVP RQAIATAMRR TVELWNEHGP VMRTAIDLSL TVPEIGNLWN QTADLFIEAI AAVLEHAGVE PGDEPKQASA MARALCWMIE RNFYHASQES RESLQNTSDT CEHIWLISSG LS
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