| SNSL254_A0154 |
CDS |
NC_011080 |
165834 |
166877 |
+ |
1044 |
guanosine 5'-monophosphate oxidoreductase |
YP_002039373 |
decreased coverage |
0.000490332 |
normal |
1 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A0155 |
CDS |
NC_011080 |
166908 |
168110 |
- |
1203 |
type IV pilin biogenesis protein |
YP_002039374 |
decreased coverage |
0.000866014 |
normal |
1 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A0322 |
CDS |
NC_011080 |
339872 |
340318 |
+ |
447 |
putative cytoplasmic protein |
YP_002039529 |
normal |
1 |
decreased coverage |
0.00238894 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A0384 |
CDS |
NC_011080 |
393244 |
393987 |
+ |
744 |
putative response regulator |
YP_002039582 |
decreased coverage |
0.00164652 |
hitchhiker |
0.00364689 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A0396 |
CDS |
NC_011080 |
406348 |
407601 |
+ |
1254 |
major facilitator superfamily MFS_1 |
YP_002039594 |
normal |
0.786385 |
decreased coverage |
4.1004499999999995e-20 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A0397 |
CDS |
NC_011080 |
407790 |
409748 |
+ |
1959 |
type III restriction-modification system StyLTI enzyme mod |
YP_002039595 |
normal |
1 |
decreased coverage |
1.4274e-23 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A0448 |
CDS |
NC_011080 |
463288 |
463869 |
- |
582 |
acyl carrier protein phosphodiesterase |
YP_002039644 |
decreased coverage |
0.00566103 |
normal |
1 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A0492 |
CDS |
NC_011080 |
502995 |
504476 |
- |
1482 |
muropeptide transporter |
YP_002039687 |
hitchhiker |
0.00144184 |
decreased coverage |
0.00023941 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A0590 |
CDS |
NC_011080 |
603516 |
604901 |
+ |
1386 |
cysteinyl-tRNA synthetase |
YP_002039781 |
decreased coverage |
0.00144184 |
normal |
0.0627987 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A0796 |
CDS |
NC_011080 |
809172 |
810380 |
+ |
1209 |
dihydrolipoamide succinyltransferase |
YP_002039974 |
decreased coverage |
0.00078998 |
normal |
0.104109 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A0807 |
CDS |
NC_011080 |
817513 |
817917 |
+ |
405 |
acyl-CoA thioester hydrolase YbgC |
YP_002039985 |
decreased coverage |
0.000852325 |
normal |
0.479233 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A0816 |
tRNA |
NC_011080 |
823510 |
823585 |
+ |
76 |
tRNA-Lys |
|
decreased coverage |
0.0000928863 |
normal |
0.881933 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A0817 |
tRNA |
NC_011080 |
823634 |
823711 |
+ |
78 |
tRNA-Lys |
|
decreased coverage |
0.0000862266 |
normal |
0.885127 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A0993 |
CDS |
NC_011080 |
997185 |
997679 |
+ |
495 |
leucine-responsive transcriptional regulator |
YP_002040158 |
decreased coverage |
0.000182939 |
normal |
1 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A1046 |
CDS |
NC_011080 |
1061742 |
1064627 |
- |
2886 |
gifsy-1 prophage RecE |
YP_002040211 |
normal |
0.74306 |
decreased coverage |
0.00000020097 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A1047 |
CDS |
NC_011080 |
1064754 |
1064990 |
- |
237 |
hypothetical protein |
YP_002040212 |
decreased coverage |
0.00211833 |
hitchhiker |
0.000000991204 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A1048 |
CDS |
NC_011080 |
1065075 |
1065233 |
- |
159 |
hypothetical protein |
YP_002040213 |
decreased coverage |
0.00172615 |
hitchhiker |
0.00000103589 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A1056 |
|
NC_011080 |
1068820 |
1069131 |
+ |
312 |
|
|
normal |
1 |
decreased coverage |
0.000000194816 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A1058 |
CDS |
NC_011080 |
1069791 |
1070024 |
+ |
234 |
hypothetical protein |
YP_002040222 |
normal |
0.767989 |
decreased coverage |
0.000000199344 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A1132 |
CDS |
NC_011080 |
1137629 |
1138183 |
- |
555 |
hypothetical protein |
YP_002040292 |
normal |
1 |
decreased coverage |
3.80525e-27 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A1136 |
CDS |
NC_011080 |
1142446 |
1142661 |
- |
216 |
hypothetical protein |
YP_002040296 |
decreased coverage |
0.0000785299 |
hitchhiker |
2.57136e-26 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A1137 |
CDS |
NC_011080 |
1142695 |
1143042 |
+ |
348 |
hypothetical protein |
YP_002040297 |
decreased coverage |
0.000105893 |
hitchhiker |
3.11479e-26 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A1138 |
CDS |
NC_011080 |
1143065 |
1143289 |
+ |
225 |
hypothetical protein |
YP_002040298 |
decreased coverage |
0.000103897 |
hitchhiker |
5.31565e-25 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A1294 |
CDS |
NC_011080 |
1281007 |
1281741 |
+ |
735 |
3-ketoacyl-(acyl-carrier-protein) reductase |
YP_002040449 |
unclonable |
0.0000278688 |
decreased coverage |
9.664719999999999e-20 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A1295 |
CDS |
NC_011080 |
1281897 |
1282133 |
+ |
237 |
acyl carrier protein |
YP_002040450 |
unclonable |
0.00000656136 |
decreased coverage |
3.5580799999999995e-20 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A1378 |
CDS |
NC_011080 |
1353976 |
1354617 |
+ |
642 |
hypothetical protein |
YP_002040526 |
normal |
0.0678824 |
decreased coverage |
0.0000214303 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A1408 |
CDS |
NC_011080 |
1377579 |
1378622 |
+ |
1044 |
selenophosphate synthetase |
YP_002040554 |
decreased coverage |
0.00232464 |
normal |
0.656366 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A1574 |
|
NC_011080 |
1538304 |
1538462 |
- |
159 |
|
|
decreased coverage |
0.00730785 |
normal |
0.29488 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A1588 |
CDS |
NC_011080 |
1555157 |
1556686 |
+ |
1530 |
NAD(P) transhydrogenase subunit alpha |
YP_002040726 |
decreased coverage |
0.00820471 |
normal |
0.701407 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A1788 |
CDS |
NC_011080 |
1754890 |
1755576 |
+ |
687 |
B3/4 domain protein |
YP_002040916 |
decreased coverage |
0.00972614 |
normal |
0.283564 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A1832 |
CDS |
NC_011080 |
1797870 |
1799039 |
- |
1170 |
tetratricopeptide repeat protein |
YP_002040959 |
decreased coverage |
0.00100254 |
unclonable |
2.05101e-30 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A1952 |
CDS |
NC_011080 |
1910452 |
1911159 |
+ |
708 |
septum formation inhibitor |
YP_002041071 |
decreased coverage |
0.00224738 |
normal |
1 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A1954 |
CDS |
NC_011080 |
1911183 |
1911995 |
+ |
813 |
cell division inhibitor MinD |
YP_002041072 |
decreased coverage |
0.00226645 |
normal |
1 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A1955 |
CDS |
NC_011080 |
1911999 |
1912265 |
+ |
267 |
cell division topological specificity factor MinE |
YP_002041073 |
decreased coverage |
0.00065968 |
normal |
1 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A1969 |
CDS |
NC_011080 |
1926902 |
1927870 |
+ |
969 |
PTS system mannose-specific transporter subunit IIAB |
YP_002041086 |
decreased coverage |
0.000485794 |
normal |
1 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A1985 |
CDS |
NC_011080 |
1941570 |
1942256 |
- |
687 |
putative solute/DNA competence effector |
YP_002041100 |
decreased coverage |
0.000228326 |
hitchhiker |
0.0069158 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A1986 |
CDS |
NC_011080 |
1942354 |
1942851 |
- |
498 |
GAF domain protein |
YP_002041101 |
decreased coverage |
0.000139878 |
hitchhiker |
0.00643853 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A1996 |
CDS |
NC_011080 |
1950380 |
1951102 |
- |
723 |
guanine nucleotide exchange factor SopE |
YP_002041111 |
normal |
1 |
decreased coverage |
0.000141874 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A2052 |
CDS |
NC_011080 |
1993814 |
1994599 |
+ |
786 |
high-affinity zinc transporter membrane component |
YP_002041158 |
decreased coverage |
0.00746645 |
normal |
0.157438 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A2086 |
CDS |
NC_011080 |
2026666 |
2027007 |
- |
342 |
transcriptional activator FlhD |
YP_002041192 |
decreased coverage |
0.000128662 |
unclonable |
1.32042e-30 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A2145 |
CDS |
NC_011080 |
2071681 |
2072304 |
+ |
624 |
colanic acid capsular biosynthesis activation protein A |
YP_002041247 |
decreased coverage |
0.000312117 |
hitchhiker |
0.00586911 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A2279 |
CDS |
NC_011080 |
2188935 |
2190020 |
- |
1086 |
dTDP-glucose 4,6 dehydratase |
YP_002041367 |
normal |
1 |
decreased coverage |
0.0000000978054 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A2398 |
CDS |
NC_011080 |
2317448 |
2318578 |
- |
1131 |
bifunctional PTS system fructose-specific transporter subunit IIA/HPr protein |
YP_002041479 |
decreased coverage |
0.000898637 |
hitchhiker |
0.000336202 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A2407 |
CDS |
NC_011080 |
2323721 |
2324467 |
+ |
747 |
inner membrane protein YeiU |
YP_002041488 |
normal |
1 |
decreased coverage |
0.00000750111 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A2418 |
CDS |
NC_011080 |
2337655 |
2337939 |
+ |
285 |
50S ribosomal protein L25 |
YP_002041499 |
decreased coverage |
0.000585469 |
normal |
0.103403 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A2514 |
CDS |
NC_011080 |
2439083 |
2440021 |
- |
939 |
HTH-type transcriptional regulator PecT |
YP_002041590 |
decreased coverage |
0.00051335 |
normal |
0.704874 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A2580 |
CDS |
NC_011080 |
2501365 |
2502672 |
+ |
1308 |
long-chain fatty acid outer membrane transporter |
YP_002041655 |
decreased coverage |
0.00696507 |
normal |
1 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A2622 |
CDS |
NC_011080 |
2541241 |
2542104 |
+ |
864 |
putative sulfate transport protein CysZ |
YP_002041689 |
decreased coverage |
0.00041893 |
normal |
1 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A2631 |
CDS |
NC_011080 |
2548848 |
2549567 |
+ |
720 |
glutamine amidotransferase |
YP_002041698 |
decreased coverage |
0.0063485 |
normal |
1 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A2632 |
CDS |
NC_011080 |
2549626 |
2550006 |
+ |
381 |
hypothetical protein |
YP_002041699 |
decreased coverage |
0.00287639 |
normal |
1 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A2744 |
CDS |
NC_011080 |
2682981 |
2683475 |
- |
495 |
DNA-binding transcriptional regulator IscR |
YP_002041806 |
decreased coverage |
0.00512244 |
normal |
1 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A2758 |
CDS |
NC_011080 |
2696681 |
2698225 |
+ |
1545 |
DNA-binding transcriptional activator CadC |
YP_002041820 |
decreased coverage |
0.00262539 |
normal |
1 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A2838 |
CDS |
NC_011080 |
2771799 |
2772173 |
+ |
375 |
hypothetical protein |
YP_002041894 |
decreased coverage |
0.000132288 |
normal |
0.0618818 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A2839 |
CDS |
NC_011080 |
2772521 |
2772637 |
+ |
117 |
hypothetical protein |
YP_002041895 |
decreased coverage |
0.0000735552 |
normal |
0.0217362 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A2840 |
CDS |
NC_011080 |
2772630 |
2772788 |
+ |
159 |
hypothetical protein |
YP_002041896 |
decreased coverage |
0.0000763539 |
normal |
0.0219908 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A2841 |
CDS |
NC_011080 |
2772873 |
2773160 |
+ |
288 |
hypothetical protein |
YP_002041897 |
decreased coverage |
0.000099198 |
normal |
0.0329788 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A2885 |
CDS |
NC_011080 |
2815510 |
2816028 |
+ |
519 |
hypothetical protein |
YP_002041934 |
decreased coverage |
0.00516229 |
normal |
1 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A2887 |
CDS |
NC_011080 |
2817398 |
2817745 |
- |
348 |
50S ribosomal protein L19 |
YP_002041936 |
decreased coverage |
0.00407134 |
normal |
1 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A2888 |
CDS |
NC_011080 |
2817786 |
2818553 |
- |
768 |
tRNA (guanine-N(1)-)-methyltransferase |
YP_002041937 |
decreased coverage |
0.00244341 |
normal |
1 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A2938 |
CDS |
NC_011080 |
2869316 |
2870377 |
+ |
1062 |
phage portal protein pbsx family |
YP_002041984 |
normal |
1 |
decreased coverage |
3.19492e-28 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A2939 |
CDS |
NC_011080 |
2870428 |
2870697 |
+ |
270 |
zinc-finger protein |
YP_002041985 |
normal |
1 |
decreased coverage |
6.930430000000001e-29 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A2940 |
CDS |
NC_011080 |
2870671 |
2870868 |
- |
198 |
hypothetical protein |
YP_002041986 |
normal |
1 |
decreased coverage |
6.930430000000001e-29 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A2941 |
CDS |
NC_011080 |
2871002 |
2873023 |
- |
2022 |
replication gene A protein |
YP_002041987 |
normal |
1 |
decreased coverage |
2.3159e-27 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A2943 |
CDS |
NC_011080 |
2873843 |
2874172 |
- |
330 |
gp91 |
YP_002041989 |
decreased coverage |
0.00436199 |
hitchhiker |
3.58912e-27 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A2944 |
CDS |
NC_011080 |
2874163 |
2874393 |
- |
231 |
hypothetical protein |
YP_002041990 |
decreased coverage |
0.00403968 |
hitchhiker |
2.8699699999999998e-27 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A2945 |
CDS |
NC_011080 |
2874461 |
2874862 |
- |
402 |
hypothetical protein |
YP_002041991 |
decreased coverage |
0.00528477 |
hitchhiker |
4.03438e-27 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A3022 |
CDS |
NC_011080 |
2945631 |
2946197 |
- |
567 |
fructose-1-phosphatase |
YP_002042066 |
normal |
0.0218888 |
decreased coverage |
0.00000512461 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A3026 |
tRNA |
NC_011080 |
2946973 |
2947051 |
- |
79 |
tRNA-Arg |
|
unclonable |
0.00000587212 |
decreased coverage |
0.00000637793 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A3027 |
tRNA |
NC_011080 |
2947053 |
2947147 |
- |
95 |
tRNA-Ser |
|
hitchhiker |
0.0000838388 |
decreased coverage |
0.00000641147 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A3028 |
CDS |
NC_011080 |
2947450 |
2947635 |
- |
186 |
carbon storage regulator |
YP_002042067 |
hitchhiker |
0.0000946533 |
decreased coverage |
0.00000698794 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A3029 |
CDS |
NC_011080 |
2947870 |
2950500 |
- |
2631 |
alanyl-tRNA synthetase |
YP_002042068 |
normal |
0.0315037 |
decreased coverage |
0.0000367228 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A3089 |
|
NC_011080 |
3004361 |
3005590 |
- |
1230 |
|
|
normal |
0.143682 |
decreased coverage |
0.0000000503539 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A3090 |
CDS |
NC_011080 |
3005618 |
3007399 |
- |
1782 |
cell invasion protein SipB |
YP_002042126 |
normal |
1 |
decreased coverage |
0.0000000315688 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A3207 |
CDS |
NC_011080 |
3118610 |
3119527 |
- |
918 |
DNA-binding transcriptional activator GcvA |
YP_002042234 |
decreased coverage |
0.00274599 |
normal |
1 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A3237 |
CDS |
NC_011080 |
3151015 |
3152217 |
- |
1203 |
lysophospholipid transporter LplT |
YP_002042259 |
normal |
1 |
decreased coverage |
0.00000025684 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A3296 |
CDS |
NC_011080 |
3205257 |
3205586 |
+ |
330 |
Z-ring-associated protein |
YP_002042313 |
decreased coverage |
0.0000920152 |
normal |
1 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A3297 |
ncRNA |
NC_011080 |
3205628 |
3205811 |
+ |
184 |
6S / SsrS RNA |
|
decreased coverage |
0.0000721942 |
normal |
1 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A3298 |
CDS |
NC_011080 |
3205832 |
3206446 |
+ |
615 |
putative ligase |
YP_002042314 |
decreased coverage |
0.000163659 |
normal |
1 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A3338 |
CDS |
NC_011080 |
3242671 |
3244065 |
+ |
1395 |
galactose-proton symporter |
YP_002042350 |
decreased coverage |
0.0071419 |
normal |
0.395807 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A3339 |
CDS |
NC_011080 |
3244144 |
3244641 |
+ |
498 |
hypothetical protein |
YP_002042351 |
decreased coverage |
0.00105383 |
normal |
0.150558 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A3555 |
CDS |
NC_011080 |
3446749 |
3448692 |
- |
1944 |
ATP-dependent metalloprotease |
YP_002042552 |
decreased coverage |
0.00594001 |
normal |
1 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A3566 |
CDS |
NC_011080 |
3455265 |
3456377 |
+ |
1113 |
octaprenyl diphosphate synthase |
YP_002042563 |
decreased coverage |
0.000499434 |
normal |
1 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A3608 |
CDS |
NC_011080 |
3494872 |
3495300 |
- |
429 |
50S ribosomal protein L13 |
YP_002042600 |
decreased coverage |
0.000171486 |
normal |
1 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A3609 |
CDS |
NC_011080 |
3495602 |
3496726 |
- |
1125 |
ATPase, AFG1 family |
YP_002042601 |
decreased coverage |
0.000949089 |
normal |
1 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A3637 |
CDS |
NC_011080 |
3525557 |
3526600 |
- |
1044 |
rod shape-determining protein MreB |
YP_002042629 |
decreased coverage |
0.000940362 |
hitchhiker |
0.00158537 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A3646 |
CDS |
NC_011080 |
3535770 |
3536651 |
+ |
882 |
ribosomal protein L11 methyltransferase |
YP_002042638 |
normal |
0.135295 |
decreased coverage |
0.000138763 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A3647 |
CDS |
NC_011080 |
3536855 |
3537013 |
+ |
159 |
hypothetical protein |
YP_002042639 |
normal |
0.0447046 |
decreased coverage |
0.000125765 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A3649 |
CDS |
NC_011080 |
3538303 |
3538599 |
+ |
297 |
DNA-binding protein Fis |
YP_002042641 |
decreased coverage |
0.0000862266 |
hitchhiker |
0.00112277 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A3650 |
CDS |
NC_011080 |
3538685 |
3539569 |
+ |
885 |
putative methyltransferase |
YP_002042642 |
decreased coverage |
0.000365024 |
hitchhiker |
0.00241657 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A3684 |
CDS |
NC_011080 |
3566333 |
3566953 |
- |
621 |
30S ribosomal protein S4 |
YP_002042667 |
decreased coverage |
0.00775419 |
normal |
1 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A3685 |
CDS |
NC_011080 |
3566987 |
3567376 |
- |
390 |
30S ribosomal protein S11 |
YP_002042668 |
decreased coverage |
0.00109954 |
normal |
1 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A3697 |
CDS |
NC_011080 |
3572177 |
3572716 |
- |
540 |
50S ribosomal protein L5 |
YP_002042678 |
decreased coverage |
0.000182939 |
normal |
1 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A3698 |
CDS |
NC_011080 |
3572731 |
3573045 |
- |
315 |
50S ribosomal protein L24 |
YP_002042679 |
decreased coverage |
0.000743122 |
normal |
1 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A3699 |
CDS |
NC_011080 |
3573056 |
3573427 |
- |
372 |
50S ribosomal protein L14 |
YP_002042680 |
decreased coverage |
0.000119434 |
normal |
1 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A3709 |
CDS |
NC_011080 |
3577574 |
3578203 |
- |
630 |
50S ribosomal protein L3 |
YP_002042690 |
decreased coverage |
0.000323926 |
normal |
0.640658 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A3710 |
CDS |
NC_011080 |
3578236 |
3578547 |
- |
312 |
ribosomal protein S10 |
YP_002042691 |
decreased coverage |
0.000120586 |
normal |
0.692874 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A3740 |
CDS |
NC_011080 |
3601777 |
3602340 |
- |
564 |
para-aminobenzoate synthase component II |
YP_002042720 |
normal |
0.780045 |
decreased coverage |
0.00646888 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A3858 |
CDS |
NC_011080 |
3731624 |
3732820 |
- |
1197 |
hypothetical protein |
YP_002042834 |
decreased coverage |
0.00469108 |
normal |
1 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A4001 |
CDS |
NC_011080 |
3889100 |
3889897 |
- |
798 |
lipopolysaccharide core biosynthesis protein |
YP_002042971 |
decreased coverage |
0.00922523 |
normal |
1 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |
| SNSL254_A4004 |
CDS |
NC_011080 |
3892489 |
3893766 |
+ |
1278 |
3-deoxy-D-manno-octulosonic-acid transferase |
YP_002042974 |
decreased coverage |
0.00652138 |
normal |
1 |
Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Bacteria |
|
|
- |