| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A0396 |
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| Symbol | |
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| ID | 6486879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 406348 |
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| End bp | 407601 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642735820 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_002039594 |
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| Protein GI | 194443953 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00891] putative sialic acid transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.786385 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 4.1004499999999995e-20 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTACACCC CCCTGAACTG GACGACGACA CAACGACATG TGGCGTTTGC CAGCTTTACC
AGTTGGATGC TGGATGCGTT TGATTTCTTT ATCCTTGTCT TTGTACTTAG CGATCTCGCC
GAATGGTTTC ACGCTTCCGT ATCGGACGTT TCCATTGCGA TTATGCTGAC CCTGGCGGTA
CGTCCCATTG GCGCGCTGCT ATTTGGTCGA ATGGCGGAAA AGTACGGACG TCGACCGATA
CTGATGCTCA ATATTCTGTT CTTTACGGTG TTTGAACTGC TTTCCGCCTG GTCGCCCACC
TTCATGGCAT TTCTGATTTT TCGGGTCATG TACGGCGTGG CGATGGGCGG GATATGGGGC
GTTGCGTCAT CACTGGCGAT GGAAACCATT CCCGATCGTT CGCGTGGCCT GATGTCGGGC
ATTTTTCAGG CGGGCTATCC CTGCGGCTAT CTGTTCGCCT CGGTTATTTT TGGCCTCTTC
TACAGTATGG TAGGCTGGCG CGGCATGTTC CTGATTGGCG CCCTGCCTGT TGTCTTGCTG
CCTTATATCT GGTTTAAAGT GCCGGAATCC CCCGTCTGGC TGGCGGCCAG AGCGCGTAAA
GAGAATACCG CGCTGCTTCC TGTTCTGCGC AAGCAGTGGA AGTTGTGTCT GTATCTGGTG
CTGGTCATGG CGTTCTTTAA CTTTTTCAGT CACGGCACGC AGGATCTCTA TCCTACCTTC
CTGAAGATGC AGCATGGTTT TGATCCGCAT CTGATCAGTA TCATTGCGAT TTTTTATAAC
ATTGCCGCGA TGCTCGGCGG TATTTTCTAC GGTACGCTAT CGGAACGTAT TGGGCGTAAA
AAAGCGATCA TGATCGCCGC CTTTCTTGCG CTTCCGGTAC TCCCGCTATG GGCATTTTCC
AGCGGATCAT TCACGATTGG CCTGGGCGCG TTCCTGATGC AGTTTATGGT GCAGGGCGCC
TGGGGTGTCG TGCCGACCTG GCTGAACGAG CTGGTTCCGG CGAATGCGCG CGCCGTGCTG
CCAGGGTTTG TTTACCAACT GGGTAATTTA CTGGCGTCGG TTAATGCGAC GTTACAGGCC
CGCATCGCGG AAACGCATGG TGGCAATTAC GGGTTGGCAA TGGCGATCGT GGCTGGCGCG
GTGGCTATTT TAATCTGTGT ATTTGTGGCA TTTGGTCGCG AGACCCGGGG AGTCGTCATC
TCCGGTACAG ATAGCGACGC CCTCCCGGAG TCGGCCATCA GTCATCGCAC GTAA
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| Protein sequence | MYTPLNWTTT QRHVAFASFT SWMLDAFDFF ILVFVLSDLA EWFHASVSDV SIAIMLTLAV
RPIGALLFGR MAEKYGRRPI LMLNILFFTV FELLSAWSPT FMAFLIFRVM YGVAMGGIWG
VASSLAMETI PDRSRGLMSG IFQAGYPCGY LFASVIFGLF YSMVGWRGMF LIGALPVVLL
PYIWFKVPES PVWLAARARK ENTALLPVLR KQWKLCLYLV LVMAFFNFFS HGTQDLYPTF
LKMQHGFDPH LISIIAIFYN IAAMLGGIFY GTLSERIGRK KAIMIAAFLA LPVLPLWAFS
SGSFTIGLGA FLMQFMVQGA WGVVPTWLNE LVPANARAVL PGFVYQLGNL LASVNATLQA
RIAETHGGNY GLAMAIVAGA VAILICVFVA FGRETRGVVI SGTDSDALPE SAISHRT
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