| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A1969 |
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| Symbol | manX |
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| ID | 6486516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 1926902 |
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| End bp | 1927870 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642737336 |
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| Product | PTS system mannose-specific transporter subunit IIAB |
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| Protein accession | YP_002041086 |
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| Protein GI | 194446658 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2893] Phosphotransferase system, mannose/fructose-specific component IIA
[COG3444] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB |
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| TIGRFAM ID | [TIGR00824] PTS system, mannose/fructose/sorbose family, IIA component
[TIGR00854] PTS system, mannose/fructose/sorbose family, IIB component |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000485794 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 75 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCATTG CTATTGTTAT AGGCACACAT GGTTGGGCTG CAGAGCAGTT ACTTAAAACA
GCCGAAATGC TGTTAGGCGA GCAGGAAAAC GTCGGCTGGA TCGATTTCGT TCCAGGCGAA
AATGCCGAAA CGCTGATCGA AAAGTACAAC GCTCAGTTGG CTAAACTCGA TACCAGTAAA
GGCGTGCTAT TTCTCGTTGA TACATGGGGA GGCAGTCCGT TTAATGCTGC CAGCCGCATT
GTCGTCGATA AAGAGCGCTA TGAAGTTATT GCCGGCGTCA ACATCCCGAT GCTGGTCGAA
ACGTTTATGG CTCGTGACGA CGATCCGAGC TTTGACGAGC TGGTCGCACT GGCGGTAGAA
ACCGGTCGTG AAGGCGTAAA AGCGCTGAAA GCGAAACCGG TAGAAAAAGC CGCGCCAGCG
CCAGTCGCCG CCGCGCCAAA AGCGGCCGCA CCGGCAAAAC CGATGGGCCC GAATGATTAT
ATGGTTATCG GGCTTGCCCG TATTGATGAC CGCCTCATTC ACGGTCAGGT CGCTACCCGC
TGGACCAAAG AGACCAATGT CAGCCGTATT ATTGTTGTGA GCGATGAAGT GGCGGCGGAT
ACCGTTCGTA AAACGCTGCT GACGCAAGTT GCGCCGCCGG GCGTTACGGC GCATGTGGTT
GACGTCGCGA AGATGATTCG CGTCTACAAT AACCCGAAAT ACGCCGGCGA ACGCGTGATG
CTTCTGTTTA CCAATCCTAC CGACGTCGAG CGCATCGTTG AGGGCGGCGT GAAAGTCACT
TCCGTGAACA TTGGCGGTAT GGCCTATCGT CAAGGTAAAA CGCAGGTGAA CAACGCCGTT
TCCGTCGATG AAAAGGATAT CGAAGCCTTT AAAAAGCTCA ACGAGCGCGG CATCGAGCTT
GAGGTGCGTA AAGTTTCCAC CGATCCGAAA CTGAAAATGA TGGATTTAAT TGCCAAAGTG
GCGAAATAA
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| Protein sequence | MTIAIVIGTH GWAAEQLLKT AEMLLGEQEN VGWIDFVPGE NAETLIEKYN AQLAKLDTSK
GVLFLVDTWG GSPFNAASRI VVDKERYEVI AGVNIPMLVE TFMARDDDPS FDELVALAVE
TGREGVKALK AKPVEKAAPA PVAAAPKAAA PAKPMGPNDY MVIGLARIDD RLIHGQVATR
WTKETNVSRI IVVSDEVAAD TVRKTLLTQV APPGVTAHVV DVAKMIRVYN NPKYAGERVM
LLFTNPTDVE RIVEGGVKVT SVNIGGMAYR QGKTQVNNAV SVDEKDIEAF KKLNERGIEL
EVRKVSTDPK LKMMDLIAKV AK
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