| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A2758 |
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| Symbol | |
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| ID | 6484750 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 2696681 |
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| End bp | 2698225 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642738086 |
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| Product | DNA-binding transcriptional activator CadC |
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| Protein accession | YP_002041820 |
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| Protein GI | 194444192 |
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| COG category | [K] Transcription |
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| COG ID | [COG3710] DNA-binding winged-HTH domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00262539 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 89 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCAAC CTGTTGTACG CATTGGAGAG TGGCTGGTTA CACCTTCTGT TAATCAGATC
AGTCGTCAGG GACGCCAGAT TACTCTTGAA CCACGGCTGA TCGATCTTCT GATGTATTTT
GCGCATCATC CGGATGAAGT GTTAAGCCGG GATAACATTA TTGATCATGT CTGGATGCGC
ACCATCGTGA CCAACCATGT TGTCACCCAA AGCATTTCTG AACTACGCAA ATCATTAAGA
GATGGCGGAG ACAGCAATGC TGAATACATC GTTACCGTAC CTAAACGCGG CTATAAGCTG
ACGGCGCCGG TTATCTGGTG CGAAGAAAAT AGCGATGAGA TCGATAATTC ATCAACGTCG
CCGCCGCCGC CGATCGCAGC GACGAATGCA GAACCGACGG AGGGGGTTAC TGCCGCTACG
CCTGTGCCGC CCGCCTCTTT GCAAACGCCG ACTAAAAAGG CGAAAAAGCC GCGTATTGCC
GCTTTCTGGA CGTGGGTGAT GTTCCTGCTC TCGCTGGCGA CGCTGGTGGT GTTTATCGTG
ATGTCGGTGG TAGATCATAA TGCCGCGGTA ACAAAAACGC GGTTATTACT TAACCCACGA
GATATAGATG TTCGTTTTGA AGGCGGCAAT TCCTGTAATA ACTGGGTCTC GCAGGAGTCC
TACGCCATCG GTCTGGGTGG CTTAATCACC GACCTGCTGA ACACCTACTC GACTTTTATG
GTGCACGATA AAACCAATTA CCGGGTCAAT GAGCCAAGCA GCTCCGGTAA GACGTTAACC
ATTCAGTTTG TCAATCAGCG CCACTATCGG GCGCAGCAGT GCTTTATGTC TGTAGTGCTC
ATTGATAACG CCGATGGTTC AACCATGCTG GATAAGCGTT ATTTCGTCAC CAATACTAAC
CAGTTGTCCA TCCAGGATGA TCTGTTTAAT AGCCTGTCTT TCGTTTTAAC ACAGCCCTGG
CCTAATCGTA TGCGAGAACA ACTGGCCCTG TTCAGAACGC CGCAAAATAC CGCGCTGATG
CGTTTTTATG AGGCGCGCCA GCTTATTCTG AGCGGCGATG CGCAGGCGCT AGGTAAAGCC
AGCGATATTC TGAATGGCAT TATTAAGGAA ACGCCTGATT TCAACTATGC CTATGAATAT
AAAGTGCTGG TAGATGTATT ACGGCAATCA CAGCAGCCGT TTGATAAAGA ACAAGTGGCC
GCACTGAACG AAGAGTTTAA AAAAATAGAT CAAATTCCGG GCGTTGAGAA AACGTCTGTT
TATTATAAAA TCAAGACCGT TGATCTTTTG GGCAAAGGTG ATATCGATGC AGCGTATGAG
GAAATCAATA AAAGCATCGA GCTTGAAATG TCGTGGTTTA ACTATGTCCT GTTGGGGAAA
GTTTACGAAA TGAAAGGTGA GAATCGTCTG GCCGCTGATG CCTATCTGAC CGCCTTTAAT
TTACGTCCAG GTGAAAACAC GCTGTACTGG ATCGAAAATG GCGTATTTCA GACATCCGTT
CAGAAAATTG TCCCTTATCT GAATAGTTTT CTGGCAGAAG ATTAA
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| Protein sequence | MQQPVVRIGE WLVTPSVNQI SRQGRQITLE PRLIDLLMYF AHHPDEVLSR DNIIDHVWMR
TIVTNHVVTQ SISELRKSLR DGGDSNAEYI VTVPKRGYKL TAPVIWCEEN SDEIDNSSTS
PPPPIAATNA EPTEGVTAAT PVPPASLQTP TKKAKKPRIA AFWTWVMFLL SLATLVVFIV
MSVVDHNAAV TKTRLLLNPR DIDVRFEGGN SCNNWVSQES YAIGLGGLIT DLLNTYSTFM
VHDKTNYRVN EPSSSGKTLT IQFVNQRHYR AQQCFMSVVL IDNADGSTML DKRYFVTNTN
QLSIQDDLFN SLSFVLTQPW PNRMREQLAL FRTPQNTALM RFYEARQLIL SGDAQALGKA
SDILNGIIKE TPDFNYAYEY KVLVDVLRQS QQPFDKEQVA ALNEEFKKID QIPGVEKTSV
YYKIKTVDLL GKGDIDAAYE EINKSIELEM SWFNYVLLGK VYEMKGENRL AADAYLTAFN
LRPGENTLYW IENGVFQTSV QKIVPYLNSF LAED
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