Gene SNSL254_A1378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1378 
Symbol 
ID6482313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand+ 
Start bp1353976 
End bp1354617 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content51% 
IMG OID642736772 
Producthypothetical protein 
Protein accessionYP_002040526 
Protein GI194444048 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.0678824 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.0000214303 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAAACTCG ATACCCGATT AACTTCGTCA GCACTTACTC TTGCGCTTGC CGCTGTGGTC 
ATCCCGTTTA CGGCGGACTG GCAATTGCCT TTGCTTAACG GCGTGGTGGT CCGATGGATT 
GAAAACGGAC AAGCGTTATG GTTACTGTTT GGGGCGCTAT TTACCGCCTG GTATATACGG 
CCACTTTCCC GTCCCGAAGG GGCAAAGCAG TTTTGGCTAT GGGCTGTTGT CTGGTGGGTG 
GTGCTATTGG GTAGAAGCAC CAGTTGGGGG CGTGACTATT TCCCTGACGA GCCGCGTATG 
CTGTTCAGAA CGATTTCAGT GATATTAATT GCTGCGTTGG TATTGCCAGT CCTGTTTTCT 
GCCGGGCTAC GTAAGGAGAT TGTTCGTCGT CTGCGGGACG TTCCTCTGCC ATTGTGGCTG 
TTTACCGTGA CGGCATGTTC ATATCTGATT TCCGACACTG TCGAGCATCA TCGCTGGTTG 
TCGCCGATAT TCCTGCATAA CGCGCGTTAC ACAGATTTGA TTGAAGAGCT TTATGAAGTG 
CCATTTATGA TCGGTTTGTT TATGGTGACC GTGGTGTTTA TGCAGCAGGA CAAGCAGGAT 
GAATGTACGG CGCTGGAGAT GACCCCGTAT CACGCAAAAT AG
 
Protein sequence
MKLDTRLTSS ALTLALAAVV IPFTADWQLP LLNGVVVRWI ENGQALWLLF GALFTAWYIR 
PLSRPEGAKQ FWLWAVVWWV VLLGRSTSWG RDYFPDEPRM LFRTISVILI AALVLPVLFS 
AGLRKEIVRR LRDVPLPLWL FTVTACSYLI SDTVEHHRWL SPIFLHNARY TDLIEELYEV 
PFMIGLFMVT VVFMQQDKQD ECTALEMTPY HAK