| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3029 |
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| Symbol | alaS |
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| ID | 6483894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 2947870 |
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| End bp | 2950500 |
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| Gene Length | 2631 bp |
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| Protein Length | 876 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642738344 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_002042068 |
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| Protein GI | 194443356 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0315037 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.0000367228 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAGCAAGA GCACCGCTGA GATCCGTCAG GCGTTTCTCG ACTTTTTCCA TAGTAAAGGG
CATCAGGTAG TTGCCAGCAG TTCCCTGGTG CCTAACAATG ACCCCACTCT GTTGTTTACC
AATGCCGGGA TGAACCAGTT CAAGGATGTT TTCCTTGGGC TCGATAAACG TAATTATTCC
CGTGCAACCA CTTCCCAGCG TTGCGTACGC GCGGGGGGTA AACACAACGA TCTGGAAAAC
GTCGGATACA CTGCACGTCA CCATACTTTC TTCGAAATGC TGGGCAACTT CAGCTTCGGC
GATTACTTCA AACACGACGC CATTCAGTTC GCATGGGAAT TACTGACCGG TGAAAACTGG
TTTGCTCTGC CAAAAGAGCG TTTATGGGTC ACCGTCTATG AAACCGACGA CGAAGCCTAT
GAGATCTGGG AAAAAGAAGT CGGCATCCCG CGCGAGCGTA TTATCCGTAT CGGCGACAAT
AAAGGCGCGC CATACGCATC GGATAACTTC TGGCAGATGG GCGATACCGG TCCCTGCGGT
CCGTGTACCG AAATCTTCTA CGATCATGGC GACCACATCT GGGGCGGCCC TCCGGGAAGC
CCGGAAGAAG ACGGCGATCG CTATATTGAG ATCTGGAACA TCGTCTTTAT GCAGTTCAAC
CGTCAGGCTG ACGGGACGAT GGAACCATTG CCGAAACCGT CTGTAGATAC CGGTATGGGG
CTGGAGCGTA TTGCCGCGGT ACTGCAACAC GTTAACTCTA ACTATGACAT CGACCTGTTC
CGCACGTTGA TTGAAGCGGT AGCGAAAGTC ACCGGCGCTA CCGATCTGGG TAATAAATCG
CTGCGCGTTA TCGCCGACCA CATCCGTTCT TGCGCATTCC TGGTTGCCGA TGGCGTGCTG
CCGTCGAATG AAAACCGTGG TTATGTGCTG CGTCGCATTA TTCGTCGCGC GGTTCGTCAC
GGCAACATGC TGGGCGCGAA AGAGACCTTC TTCTACAAGC TGGTTGGGCC GCTGATTGAG
GTAATGGGCT CCGCAGGCGA AGAGTTGAAA CGTCAGCAGG CGCAGGTCGA GCAGGTTCTG
AAAACGGAAG AAGAGCAGTT CGCTCGTACG CTGGAGCGCG GTCTGGCGCT GCTGGATGAA
GAACTGGCGA AATTGCAGGG CGACACCCTG GACGGCGAAA CCGCTTTCCG TCTGTATGAT
ACTTATGGTT TCCCGGTCGA TCTAACGGCG GACGTCTGCC GTGAGCGCAA CATCAAAGTC
GACGAAGCCG GTTTTGAAGC CGCTATGGAA GAGCAACGCC GTCGCGCGCG CGAAGCTAGC
GGTTTTGGCG CGGACTACAA CGCGATGATC CGCGTTGATA GCGCTTCTGA ATTTAAAGGT
TATGACCATC TGGAACTGAA CGGCAAAGTG ACTGCGCTGT TTGTCGATGG TAAAGCGGTT
GAAGCGATTA ACGCGGGACA GGAAGCGGTT GTCGTGCTGG ATCAGACCCC ATTCTATGCG
GAATCAGGCG GTCAGGTTGG CGATAAAGGC GAGCTGAAAG GCGCTGGATT TACTTTCGCT
GTGGACGACA CGCAAAAATA TGGTCAGGCG ATTGGTCACC TCGGTAAATT GTCTGCGGGC
GCTCTGAAAG TGGGCGATGC GGTACAGGCT GACGTAGATG AAGCGCGCCG CGCACGTATC
CGTCTGAACC ACTCCGCCAC GCACCTGATG CACGCGGCGT TGCGCCAGGT GCTTGGGACA
CACGTTGCGC AGAAAGGTTC GCTGGTTAGC GATAAAGTGC TGCGCTTCGA CTTCTCGCAC
AATGAAGCGA TGAAGCCGTC GGAGATTCGT GAGGTTGAAG ATTTGGTGAA TGCGCAAATT
CGCCGCAACC TGCCGATTGA AACGAACATC ATGGATCTCG ACGCGGCGAA GGCGAAAGGG
GCCATGGCGC TGTTTGGCGA GAAATACGAC GAACGTGTAC GCGTTCTGAG CATGGGCGAT
TTTTCTACCG AACTGTGCGG CGGTACTCAC GCCAGTCGTA CCGGTGATAT CGGTCTATTC
CGTATTATCT CTGAGTCCGG CACCGCAGCG GGCATTCGTC GTATTGAGGC GGTAACCGGT
GAAGGCGCTA TGGCCACCGT TCATGCGCAA AGCGATCGCT TAAACGATAT TGCGCATCTG
CTGAAGGGCG ACAGCCAGAA TCTGGGCGAC AAAGTGCGTG CCGTGCTGGA ACGTACACGT
CAGCTGGAAA AAGAGTTGCA GCAGTTGAAG GACCAGGCCG CAGCGCAGGA GAGTGCAAAT
CTTTCCAGTA AAGCGGTCGA TCTCAACGGC GTGAAGCTCC TGGTCAGCGA GCTTGCTGGT
ATTGAGCCGA AAATGCTGCG AACCATGGTT GATGATCTGA AAAATCAACT GGGGTCTACC
GTTATCGTAC TGGCAACGGT TGTTGAAGGT AAGGTTTCTC TGATTGCGGG CGTGTCGAAG
GATGTGACCG ACCGGGTTAA AGCAGGGGAA TTGATTGGGA TGGTCGCTCA GCAGGTGGGC
GGTAAGGGTG GCGGTCGTCC GGACATGGCG CAAGCCGGTG GTACGGATGC GGCAGCTCTG
CCTGCAGCGT TAGCCAGTGT ACAAGGCTGG GTCAGCGCAA AATTGCAATA A
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| Protein sequence | MSKSTAEIRQ AFLDFFHSKG HQVVASSSLV PNNDPTLLFT NAGMNQFKDV FLGLDKRNYS
RATTSQRCVR AGGKHNDLEN VGYTARHHTF FEMLGNFSFG DYFKHDAIQF AWELLTGENW
FALPKERLWV TVYETDDEAY EIWEKEVGIP RERIIRIGDN KGAPYASDNF WQMGDTGPCG
PCTEIFYDHG DHIWGGPPGS PEEDGDRYIE IWNIVFMQFN RQADGTMEPL PKPSVDTGMG
LERIAAVLQH VNSNYDIDLF RTLIEAVAKV TGATDLGNKS LRVIADHIRS CAFLVADGVL
PSNENRGYVL RRIIRRAVRH GNMLGAKETF FYKLVGPLIE VMGSAGEELK RQQAQVEQVL
KTEEEQFART LERGLALLDE ELAKLQGDTL DGETAFRLYD TYGFPVDLTA DVCRERNIKV
DEAGFEAAME EQRRRAREAS GFGADYNAMI RVDSASEFKG YDHLELNGKV TALFVDGKAV
EAINAGQEAV VVLDQTPFYA ESGGQVGDKG ELKGAGFTFA VDDTQKYGQA IGHLGKLSAG
ALKVGDAVQA DVDEARRARI RLNHSATHLM HAALRQVLGT HVAQKGSLVS DKVLRFDFSH
NEAMKPSEIR EVEDLVNAQI RRNLPIETNI MDLDAAKAKG AMALFGEKYD ERVRVLSMGD
FSTELCGGTH ASRTGDIGLF RIISESGTAA GIRRIEAVTG EGAMATVHAQ SDRLNDIAHL
LKGDSQNLGD KVRAVLERTR QLEKELQQLK DQAAAQESAN LSSKAVDLNG VKLLVSELAG
IEPKMLRTMV DDLKNQLGST VIVLATVVEG KVSLIAGVSK DVTDRVKAGE LIGMVAQQVG
GKGGGRPDMA QAGGTDAAAL PAALASVQGW VSAKLQ
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