Gene SNSL254_A2086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2086 
SymbolflhD 
ID6483748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand- 
Start bp2026666 
End bp2027007 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content49% 
IMG OID642737442 
Producttranscriptional activator FlhD 
Protein accessionYP_002041192 
Protein GI194444259 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.000128662 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones0 
Fosmid unclonability p-value1.32042e-30 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGCATACAT CCGAGTTGCT AAAACACATT TATGACATCA ATTTGTCATA TTTACTCCTT 
GCACAGCGTT TGATCGTCCA GGACAAAGCA TCTGCGATGT TCCGCCTCGG TATCAACGAA 
GAGATGGCAA ACACACTGGG CGCGTTGACC CTGCCGCAGA TGGTCAAACT GGCGGAGACG 
AACCAGTTAG TTTGTCATTT CCGGTTTGAC GATCATCAGA CGATCACCCG TTTGACTCAG 
GATTCGCGCG TCGATGACTT ACAGCAGATT CACACAGGTA TCATGCTTTC AACGCGTCTG 
CTCAATGAAG TGGACGATAC GGCGCGTAAG AAAAGGGCAT GA
 
Protein sequence
MHTSELLKHI YDINLSYLLL AQRLIVQDKA SAMFRLGINE EMANTLGALT LPQMVKLAET 
NQLVCHFRFD DHQTITRLTQ DSRVDDLQQI HTGIMLSTRL LNEVDDTARK KRA