Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A3022 |
Symbol | |
ID | 6483033 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 2945631 |
End bp | 2946197 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642738337 |
Product | fructose-1-phosphatase |
Protein accession | YP_002042066 |
Protein GI | 194442379 |
COG category | [R] General function prediction only |
COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR02009] beta-phosphoglucomutase family hydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0218888 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.00000512461 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGTACGCAC GTTATGCTGG TTTGATTTTT GATATGGACG GTACTCTCCT GGATACCGAA CCCACGCATC GCAAAGCGTG GCGTGAGGTT TTGGGGCGCT ATGGTCTTCG TTTTGATGAA CAGGCAATGG TCGCGCTTAA CGGTTCGCCA ACCTGGCTTA TCGCCCAGTC AATCATTGAG CTTAACCATG CCGATCTTGA TCCCCTGTCA CTGGCGCGTG AGAAAACCGA CGCGGTAAAA AGCATCCTGC TGGACTGCGT AGAACCGCTG CCGCTGGTTG AGGTGGTCAA AGCGTGGCAT GGGCGGCGTC CCATGTCGGT CGGTACCGGT AGCGAAAGCG CTATCGCGGA AGCCTTGTTA GCGCATCTGG GGCTGCGTCG TTATTTTGAT GCGGTTGTGG CGGCAGATCA CGTACAGCAT CACAAACCTG CGCCTGACAT CTTCCTACTG TGCGCCCAGC GGATGGGCGT CATGCCGACG CAGTGCGTGG TATTTGAAGA TGCCGATTTT GGTTTACAGG CGGCGCGGGC GGCGGGAATG GATGCCGTGG ATGTCCGACT ATTGTGA
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Protein sequence | MYARYAGLIF DMDGTLLDTE PTHRKAWREV LGRYGLRFDE QAMVALNGSP TWLIAQSIIE LNHADLDPLS LAREKTDAVK SILLDCVEPL PLVEVVKAWH GRRPMSVGTG SESAIAEALL AHLGLRRYFD AVVAADHVQH HKPAPDIFLL CAQRMGVMPT QCVVFEDADF GLQAARAAGM DAVDVRLL
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