Gene SNSL254_A3022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3022 
Symbol 
ID6483033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2945631 
End bp2946197 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content56% 
IMG OID642738337 
Productfructose-1-phosphatase 
Protein accessionYP_002042066 
Protein GI194442379 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR02009] beta-phosphoglucomutase family hydrolase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0218888 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.00000512461 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTACGCAC GTTATGCTGG TTTGATTTTT GATATGGACG GTACTCTCCT GGATACCGAA 
CCCACGCATC GCAAAGCGTG GCGTGAGGTT TTGGGGCGCT ATGGTCTTCG TTTTGATGAA
CAGGCAATGG TCGCGCTTAA CGGTTCGCCA ACCTGGCTTA TCGCCCAGTC AATCATTGAG
CTTAACCATG CCGATCTTGA TCCCCTGTCA CTGGCGCGTG AGAAAACCGA CGCGGTAAAA
AGCATCCTGC TGGACTGCGT AGAACCGCTG CCGCTGGTTG AGGTGGTCAA AGCGTGGCAT
GGGCGGCGTC CCATGTCGGT CGGTACCGGT AGCGAAAGCG CTATCGCGGA AGCCTTGTTA
GCGCATCTGG GGCTGCGTCG TTATTTTGAT GCGGTTGTGG CGGCAGATCA CGTACAGCAT
CACAAACCTG CGCCTGACAT CTTCCTACTG TGCGCCCAGC GGATGGGCGT CATGCCGACG
CAGTGCGTGG TATTTGAAGA TGCCGATTTT GGTTTACAGG CGGCGCGGGC GGCGGGAATG
GATGCCGTGG ATGTCCGACT ATTGTGA
 
Protein sequence
MYARYAGLIF DMDGTLLDTE PTHRKAWREV LGRYGLRFDE QAMVALNGSP TWLIAQSIIE 
LNHADLDPLS LAREKTDAVK SILLDCVEPL PLVEVVKAWH GRRPMSVGTG SESAIAEALL
AHLGLRRYFD AVVAADHVQH HKPAPDIFLL CAQRMGVMPT QCVVFEDADF GLQAARAAGM
DAVDVRLL