12 homologs were found in PanDaTox collection
for query gene SNSL254_A1574 on replicon NC_011080
Organism: Salmonella enterica subsp. enterica serovar Newport str. SL254



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011080  SNSL254_A1574    100 
 
 		 159 bp  315  1.9999999999999998e-84  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  decreased coverage  0.00730785  normal  0.29488 
 
 
-
 
NC_011205  SeD_A1878    100 
 
 		 150 bp  297  5e-79  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.502177  normal  1 
 
 
-
 
NC_011094  SeSA_A1563  bifunctional PTS system maltose and glucose-specific transporter subunits IICB  94.97 
 
 		 1593 bp  252  2e-65  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.802784  normal  0.303466 
 
 
-
 
CP001509  ECD_01590  fused maltose and glucose-specific PTS enzymes: IIB component - IIC component  81.76 
 
 		 1593 bp  85.7  0.000000000000003  Escherichia coli BL21(DE3)  Bacteria  normal  0.244243  n/a   
 
 
-
 
CP001637  EcDH1_2021  PTS system, maltose and glucose-specific IIBC subunit  81.76 
 
 		 1593 bp  85.7  0.000000000000003  Escherichia coli DH1  Bacteria  normal  0.271957  n/a   
 
 
-
 
NC_009800  EcHS_A1696  bifunctional PTS system maltose and glucose-specific transporter subunits IICB  81.76 
 
 		 1593 bp  85.7  0.000000000000003  Escherichia coli HS  Bacteria  normal  1  n/a   
 
 
-
 
NC_009801  EcE24377A_1829  bifunctional PTS system maltose and glucose-specific transporter subunits IICB  81.76 
 
 		 1593 bp  85.7  0.000000000000003  Escherichia coli E24377A  Bacteria  normal  1  n/a   
 
 
-
 
NC_010468  EcolC_2009    81.76 
 
 		 1592 bp  85.7  0.000000000000003  Escherichia coli ATCC 8739  Bacteria  hitchhiker  0.00861752  normal  0.724583 
 
 
-
 
NC_010658  SbBS512_E1809  bifunctional PTS system maltose and glucose-specific transporter subunits IICB  81.76 
 
 		 1593 bp  85.7  0.000000000000003  Shigella boydii CDC 3083-94  Bacteria  normal  1  n/a   
 
 
-
 
NC_011353  ECH74115_2333  bifunctional PTS system maltose and glucose-specific transporter subunits IICB  81.76 
 
 		 1593 bp  85.7  0.000000000000003  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012892  B21_01580  hypothetical protein  81.76 
 
 		 1593 bp  85.7  0.000000000000003  Escherichia coli BL21  Bacteria  normal  0.232012  n/a   
 
 
-
 
NC_010498  EcSMS35_1578  bifunctional PTS system maltose and glucose-specific transporter subunits IICB  81.41 
 
 		 1593 bp  79.8  0.0000000000002  Escherichia coli SMS-3-5  Bacteria  normal  1  normal  1 
 
 
-
 
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