Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A1588 |
Symbol | pntA |
ID | 6485961 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 1555157 |
End bp | 1556686 |
Gene Length | 1530 bp |
Protein Length | 509 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642736974 |
Product | NAD(P) transhydrogenase subunit alpha |
Protein accession | YP_002040726 |
Protein GI | 194444539 |
COG category | [C] Energy production and conversion |
COG ID | [COG3288] NAD/NADP transhydrogenase alpha subunit |
TIGRFAM ID | [TIGR00561] NAD(P) transhydrogenase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00820471 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 0.701407 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAATTG GCATACCAAA AGAGCGGTTA CCCAATGAAA CCCGTGTCGC TGCGACGCCG AAAACGGTAG AGCAGCTACT GAAGCTGGGG TTTAGCGTCG CTATCGAAAG CGGGGCGGGT CAACTGGCAA GTTTTGACGA CAAAGCGTTT GCGCAGGCTG GCGCGGATAT TGTAGACGGC AATGCTATCT GGCAGTCGGA AATTATTCTC AAGGTTAATG CGCCTGAAGA AGAGGAAATC GCTTTACTGA ACCCCGGGAC TACGCTGGTC AGTTTTATCT GGCCTGCGCA AAATCCTGGG TTAATGGAGA AACTTGCCGA ACGTAAGGTT ACGGTGATGG CGATGGACTC CGTGCCGCGT ATTTCCCGCG CGCAGTCGCT CGACGCGTTA AGCTCAATGG CGAATATCGC GGGTTATCGC GCCATTGTAG AGGCCGCGCA TGAATTTGGG CGCTTCTTTA CCGGCCAAAT CACTGCCGCC GGGAAAGTGC CGCCGGCGAA GGTGATGGTG ATTGGCGCGG GCGTTGCCGG TCTTGCGGCT ATCGGCGCGG CAAACAGCCT GGGGGCGATT GTCCGCGCGT TTGACACTCG TCCTGAAGTC AAAGAGCAGG TCCAGAGTAT GGGGGCTGAG TTCCTCGAAC TGGATTTTAA AGAGGAAGCC GGTAGCGGCG ATGGTTACGC CAAAGTGATG TCCGAGGCGT TTATCAAAGC GGAAATGGCG CTCTTTGCCG CCCAGGCCAA AGAGGTCGAC ATCATTGTGA CCACTGCATT GATTCCGGGT AAACCAGCGC CGAAGCTGAT TACCCGCGAT ATGGTCGATT CTATGAAGGC CGGCAGCGTG ATTGTCGACC TGGCCGCGCA GAATGGCGGT AACTGCGAAT ATACCGTCGC CAATCAGGTT GTGACGACGG ACAATGGCGT AAAAGTGATT GGCTACACCG ATCTACCGGG GCGTTTGCCG ACGCAGTCAT CCCAGCTTTA TGGCACCAAC CTGGTTAACC TGCTGAAGCT GCTGTGCAAA GAGAAAGACG GCAATATTGA CGTGGATTTT GACGATGTCG TGATCCGTGG CGTGACGGTG ATTCGCGACG GCGACATTAC CTGGCCTGCG CCGCCAATCC AGGTTTCCGC GCAGCCACAA GCCGCGCCTA AAGCAGCACC TGCGCCAAAA GAGCCGGAAA AGCCCGCTTC ACCCTGGCGG AAGTATGCGT TAATGGCGCT GGCGATCATT CTTTTTGGTT GGCTGGCCGA TGTCGCGCCA AAAGAGTTCC TCGGCCATTT TACCGTGTTT GCGCTCGCCT GCGTGGTTGG TTATTACGTG GTGTGGAACG TGTCTCATGC GCTTCATACG CCATTAATGT CGGTGACCAA CGCAATTTCA GGGATTATTG TTGTCGGGGC ATTATTGCAA ATTGGTCAGG GCGGCTGGGT CAGCTTCCTG AGCTTTATCG CGGTGCTTAT CGCCAGCATT AATATTTTCG GTGGCTTCAC CGTGACTCAG CGTATGCTGA AAATGTTCCG GAAAAACTAA
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Protein sequence | MRIGIPKERL PNETRVAATP KTVEQLLKLG FSVAIESGAG QLASFDDKAF AQAGADIVDG NAIWQSEIIL KVNAPEEEEI ALLNPGTTLV SFIWPAQNPG LMEKLAERKV TVMAMDSVPR ISRAQSLDAL SSMANIAGYR AIVEAAHEFG RFFTGQITAA GKVPPAKVMV IGAGVAGLAA IGAANSLGAI VRAFDTRPEV KEQVQSMGAE FLELDFKEEA GSGDGYAKVM SEAFIKAEMA LFAAQAKEVD IIVTTALIPG KPAPKLITRD MVDSMKAGSV IVDLAAQNGG NCEYTVANQV VTTDNGVKVI GYTDLPGRLP TQSSQLYGTN LVNLLKLLCK EKDGNIDVDF DDVVIRGVTV IRDGDITWPA PPIQVSAQPQ AAPKAAPAPK EPEKPASPWR KYALMALAII LFGWLADVAP KEFLGHFTVF ALACVVGYYV VWNVSHALHT PLMSVTNAIS GIIVVGALLQ IGQGGWVSFL SFIAVLIASI NIFGGFTVTQ RMLKMFRKN
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