Gene SNSL254_A1047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1047 
Symbol 
ID6482499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand- 
Start bp1064754 
End bp1064990 
Gene Length237 bp 
Protein Length78 aa 
Translation table11 
GC content38% 
IMG OID642736453 
Producthypothetical protein 
Protein accessionYP_002040212 
Protein GI194446340 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.00211833 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.000000991204 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAAATCG TAAAAATCGA AATGAACCTG AAAGCAGTTA ATAAGAGCAT TGCTTTATTC 
AATTGCGAAA ATCTCGACGG TGGATATGTA CTCGGAAAGT TCGACAGTCC TCATTGTGCT 
GTAAAAGCCA TTTCGCTGCT CACAGTCAAG GTAAGTGATG GAGAACAAGC AGGGTTTGGT 
AATTACCGAA GTTACAAGCT TGATTACTCA GAAAAATTTT ATCAGACCAT CCATTAA
 
Protein sequence
MEIVKIEMNL KAVNKSIALF NCENLDGGYV LGKFDSPHCA VKAISLLTVK VSDGEQAGFG 
NYRSYKLDYS EKFYQTIH